RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 IPPQ9Y573 584 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 MEIOCA2RUB1 952 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 FFAR3O14843 346 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 GPR42O15529 346 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 CDKN2CP42773 168 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 AFF1P51825 1210 aaKnown RBP10.6□□□□□ -0.71
ZNF558-201ENST00000301475 CYP4F2P78329 520 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 DOC2BQ14184 412 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 DUSP7Q16829 419 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 ALFQ53S48 1182 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 TAPT1Q6NXT6 567 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 P3H2Q8IVL5 708 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 DNAJC22Q8N4W6 341 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 NKAPQ8N5F7 415 aaKnown RBP10.6□□□□□ -0.71
ZNF558-201ENST00000301475 CD200R1Q8TD46 325 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 RASSF5Q8WWW0 418 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 PIK3R3Q92569 461 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 SMIM14Q96QK8 99 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 SH3GL1Q99961 368 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 SEMA3CQ99985 751 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 SLC30A2Q9BRI3 323 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 TTPALQ9BTX7 342 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 GIMAP4Q9NUV9 329 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 PNMA8CA0A1B0GUJ8 204 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 CDK1P06493 297 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 STSP08842 583 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 PTPN6P29350 595 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 HTR7P34969 479 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 ARHGDIAP52565 204 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 C19orf57Q0VDD7 668 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 RGMBQ6NW40 437 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 MSANTD2Q6P1R3 559 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 FAHD1Q6P587 224 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 PRR23CQ6ZRP0 262 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 NOXA1Q86UR1 476 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 BPHLQ86WA6 291 aaPredicted RBP10.6□□□□□ -0.71
ZNF558-201ENST00000301475 RAB43Q86YS6 212 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 ELMOD2Q8IZ81 293 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 UMODL1-AS1Q8N2C9 162 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 GGHQ92820 318 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 TMCO6Q96DC7 493 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 TRNT1Q96Q11 434 aaKnown RBP10.6□□□□□ -0.71
ZNF558-201ENST00000301475 RPRD1BQ9NQG5 326 aaKnown RBP10.6□□□□□ -0.71
ZNF558-201ENST00000301475 ACOXLQ9NUZ1 547 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 GPR83Q9NYM4 423 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 MUTYHQ9UIF7 546 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 ZNF451Q9Y4E5 1061 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 HTTP42858 3142 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.59□□□□□ -0.71
ZNF558-201ENST00000301475 LINC00854A0A1B0GVQ3 168 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 GLTPD2A6NH11 291 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 KIAA0513O60268 411 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 HOXB9P17482 250 aaPredicted RBP10.59□□□□□ -0.71
ZNF558-201ENST00000301475 AZGP1P25311 298 aaKnown RBP10.59□□□□□ -0.71
ZNF558-201ENST00000301475 ADCYAP1R1P41586 468 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 HTR2BP41595 481 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 RGS6P49758 472 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 ARMCX4Q5H9R4 360 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 CTSL3PQ5NE16 218 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 HORMAD1Q86X24 394 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 PIANPQ8IYJ0 282 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 TEX26Q8N6G2 289 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 BRSK1Q8TDC3 778 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 SLC7A6Q92536 515 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 PEX13Q92968 403 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 HRASLS5Q96KN8 279 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 PPP3R2Q96LZ3 170 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 KCNC2Q96PR1 638 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 RTP3Q9BQQ7 232 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 MMP28Q9H239 520 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 TMLHEQ9NVH6 421 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 THUMPD1Q9NXG2 353 aaKnown RBP10.59□□□□□ -0.71
ZNF558-201ENST00000301475 MOSPD1Q9UJG1 213 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 GABRQQ9UN88 632 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 PATJQ8NI35 1801 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 HMX3A6NHT5 357 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 NDUFS3O75489 264 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 SEMG1P04279 462 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 FGF1P05230 155 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 IL6P05231 212 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 HSMCR30P0CW71 290 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 ITGA2P17301 1181 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 IFNA8P32881 189 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 TNFSF8P32971 234 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 ZNF140P52738 457 aaPredicted RBP10.59□□□□□ -0.71
ZNF558-201ENST00000301475 GTF2H2Q13888 395 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 BAK1Q16611 211 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 GTF2H2CQ6P1K8 395 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 ANGPTL6Q8NI99 470 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 GRPEL2Q8TAA5 225 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 CITED4Q96RK1 184 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 SARS2Q9NP81 518 aaKnown RBP10.59□□□□□ -0.71
ZNF558-201ENST00000301475 RAD18Q9NS91 495 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 FKBP14Q9NWM8 211 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 MIOSQ9NXC5 875 aa10.59□□□□□ -0.71
ZNF558-201ENST00000301475 NUFIP1Q9UHK0 495 aaKnown RBP10.59□□□□□ -0.71
ZNF558-201ENST00000301475 TRMT6Q9UJA5 497 aaKnown RBP10.59□□□□□ -0.71
ZNF558-201ENST00000301475 TRIP12Q14669 1992 aaPredicted RBP10.59□□□□□ -0.71
ZNF558-201ENST00000301475 A0A0B4J293 547 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 PDHXO00330 501 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms