RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 DNAJA4Q8WW22 397 aaPredicted RBP13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 JPH3Q8WXH2 748 aaPredicted RBP13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GTPBP2Q9BX10 602 aaKnown RBP13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ERVK-6Q9BXR3 956 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SEC61A2Q9H9S3 476 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 KDM4BO94953 1096 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SOX14O95416 240 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RAP2AP10114 183 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ADAM8P78325 824 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF234Q14588 700 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CRB2Q5IJ48 1285 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GDPD4Q6W3E5 623 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HMGN2P46Q86SG4 172 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR5K1Q8NHB7 308 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HERC2P3Q9BVR0 1158 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MUC13Q9H3R2 512 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF282Q9UDV7 671 aaPredicted RBP13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 LGALS13Q9UHV8 139 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PLSCR1O15162 318 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SNHG28P0DPA3 235 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CD36P16671 472 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CKMT2P17540 419 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PRDX6P30041 224 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 DHPSP49366 369 aaPredicted RBP13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CCR8P51685 355 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 KCNQ1P51787 676 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CNPY1Q3B7I2 92 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF782Q6ZMW2 699 aaPredicted RBP13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 USP43Q70EL4 1123 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TAMM41Q96BW9 452 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 DGAT2Q96PD7 388 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MAGEE1Q9HCI5 957 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 C8orf4Q9NR00 106 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GMEB2Q9UKD1 530 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MAFFQ9ULX9 164 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 C2orf92A0A1B0GVN3 265 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ERI3O43414 337 aaKnown RBP13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GATMP50440 423 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RORCP51449 518 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PLGLB1Q02325 96 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ABCA11PQ4W5N1 156 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF648Q5T619 568 aaPredicted RBP13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PRPF38BQ5VTL8 546 aaKnown RBP13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZBED6CLQ96FA7 236 aaPredicted RBP13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CAPNS2Q96L46 248 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GIMAP2Q9UG22 337 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RUVBL1Q9Y265 456 aaKnown RBP13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CHP2O43745 196 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MMP20O60882 483 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CCNOP22674 350 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MAP3K8P41279 467 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 UFM1P61960 85 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RBCK1Q9BYM8 510 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 POLR2J3Q9H1A7 115 aaKnown RBP13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 WDR26Q9H7D7 661 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PIGVQ9NUD9 493 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HAS3O00219 553 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MPZL2O60487 215 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 UBXN7O94888 489 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GNAZP19086 355 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HSD11B1P28845 292 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TEAD4Q15561 434 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SPRYD7Q5W111 196 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 C1orf52Q8N6N3 182 aaKnown RBP13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 C10orf82Q8WW14 230 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ADAD1Q96M93 576 aaKnown RBP13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FAM234BA2RU67 622 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PRAMEF12O95522 483 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PRPS2P11908 318 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PRKCDQ05655 676 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GRM2Q14416 872 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 IQCCQ4KMZ1 466 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TIMMDC1Q9NPL8 285 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FARSBQ9NSD9 589 aaKnown RBP13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TLR6Q9Y2C9 796 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CLCA3PQ9Y6N3 262 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 AFDNP55196 1824 aaKnown RBP13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 J3QLW9 94 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RB1P06400 928 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF19P17023 458 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ATF4P18848 351 aaPredicted RBP13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CLCNKAP51800 687 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CD83Q01151 205 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TBC1D25Q3MII6 688 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ACSBG2Q5FVE4 666 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PRAMEF17Q5VTA0 474 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR4E2Q8NGC2 313 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TMEM74Q96NL1 305 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF639Q9UID6 485 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MGAT4AQ9UM21 535 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OAZ3Q9UMX2 235 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PCDHGA11Q9Y5H2 935 aa13.26□□□□□ -0.29
CHRFAM7A-201ENST00000299847 WNT9AO14904 365 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 KMOO15229 486 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 UNGP13051 313 aaPredicted RBP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CCND3P30281 292 aaPredicted RBP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CRISP3P54108 245 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TPTEP56180 551 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 AP3S2P59780 193 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RBM20Q5T481 1227 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms