RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 JAGN1Q8N5M9 183 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 GPR152Q8TDT2 470 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 KLK6Q92876 244 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 DIP2BQ9P265 1576 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 ATP6AP2A0A1C7CYW4 349 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 ELOVL7A1L3X0 281 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 AXIN1O15169 862 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 ATP6AP2O75787 350 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 CNOT4O95628 575 aaKnown RBP11.82□□□□□ -0.52
PCF11-201ENST00000298281 BLKP51451 505 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 CARD16Q5EG05 197 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 IL23RQ5VWK5 629 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 KCTD9Q7L273 389 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 LAPTM4BQ86VI4 370 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 ALPK1Q96QP1 1244 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 IFT27Q9BW83 186 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 FADS3Q9Y5Q0 445 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 HEMK1Q9Y5R4 338 aaPredicted RBP11.82□□□□□ -0.52
PCF11-201ENST00000298281 A0A0U1RQK1 487 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 GPIP06744 558 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 SLC2A1P11166 492 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 FRMD7Q6ZUT3 714 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 KCNK18Q7Z418 384 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 ANKRD23Q86SG2 305 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 ZNF676Q8N7Q3 588 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 OR2T34Q8NGX1 318 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 OR2T3Q8NH03 318 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 DNAJC19Q96DA6 116 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 CIB4A0PJX0 185 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 YDJCA8MPS7 323 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 A8MVJ9 347 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 MEIS2O14770 477 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 SHBGP04278 402 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 PIM1P11309 404 aaPredicted RBP11.82□□□□□ -0.52
PCF11-201ENST00000298281 IGFBP5P24593 272 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 ZBTB2Q8N680 514 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 GRHL3Q8TE85 626 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 PLLPQ9Y342 182 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 HES2Q9Y543 173 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 HEBP2Q9Y5Z4 205 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 IFNA4P05014 189 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 FMO3P31513 532 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 ENPP2Q13822 863 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 PRKD1Q15139 912 aaPredicted RBP11.82□□□□□ -0.52
PCF11-201ENST00000298281 MED27Q6P2C8 311 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 DNAJB8Q8NHS0 232 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 ARNTL2Q8WYA1 636 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 GTPBP3Q969Y2 492 aaKnown RBP11.82□□□□□ -0.52
PCF11-201ENST00000298281 NUDT15Q9NV35 164 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 ADAMTS13Q76LX8 1427 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 M0R2N6 131 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 EDF1O60869 148 aaKnown RBP11.82□□□□□ -0.52
PCF11-201ENST00000298281 RPP14O95059 124 aaKnown RBP11.82□□□□□ -0.52
PCF11-201ENST00000298281 SLC34A2O95436 690 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 C2P06681 752 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 SPARCP09486 303 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 RPL7AP62424 266 aaKnown RBP11.82□□□□□ -0.52
PCF11-201ENST00000298281 SSX2Q16385 188 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 BCL2A1Q16548 175 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 TBRG1Q3YBR2 411 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 PPP2R2DQ66LE6 453 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 SLC24A5Q71RS6 500 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 HAS1Q92839 578 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 MEAF6Q9HAF1 191 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 PCDH10Q9P2E7 1040 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 PCDHGB7Q9Y5F8 929 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 CNTNAP1P78357 1384 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 B4DGG1 531 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 LILRB5O75023 590 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 ZMPSTE24O75844 475 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 PRPS2P11908 318 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 MMP8P22894 467 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 CDKN1CP49918 316 aaPredicted RBP11.82□□□□□ -0.52
PCF11-201ENST00000298281 EEF1A1P68104 462 aaKnown RBP11.82□□□□□ -0.52
PCF11-201ENST00000298281 NOMO1Q15155 1222 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 DEFB115Q30KQ5 88 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 EEF1A1P5Q5VTE0 462 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 SMIM15Q7Z3B0 74 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 FRS2Q8WU20 508 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 NODALQ96S42 347 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 FARSBQ9NSD9 589 aaKnown RBP11.82□□□□□ -0.52
PCF11-201ENST00000298281 TUBA8Q9NY65 449 aaPredicted RBP11.82□□□□□ -0.52
PCF11-201ENST00000298281 MALT1Q9UDY8 824 aa11.82□□□□□ -0.52
PCF11-201ENST00000298281 SH3PXD2BA1X283 911 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 HTR3EA5X5Y0 456 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 ZNF14P17017 642 aaPredicted RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 ODF4Q2M2E3 257 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 SLC44A1Q8WWI5 657 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 EIF5A2Q9GZV4 153 aaKnown RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 GPRC5BQ9NZH0 403 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 PCYT1BQ9Y5K3 369 aaPredicted RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 IGFBP1P08833 259 aaPredicted RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 UROSP10746 265 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 LEPRP48357 1165 aaKnown RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 ZNF311Q5JNZ3 666 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 GLYATQ6IB77 296 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 RBM44Q6ZP01 1051 aaKnown RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 LRFN5Q96NI6 719 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 STRADBQ9C0K7 418 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 ICKQ9UPZ9 632 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms