RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 KIAA2013Q8IYS2 634 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 MED8Q96G25 268 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 ZNF514Q96K75 400 aaPredicted RBP20.72■□□□□ 0.91
SOX17-201ENST00000297316 PKP2Q99959 881 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 WDR26Q9H7D7 661 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 BCAP29Q9UHQ4 241 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 LEF1Q9UJU2 399 aaPredicted RBP20.72■□□□□ 0.91
SOX17-201ENST00000297316 MGAT4DA6NG13 374 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 NDUFV2P19404 249 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 TRAP1Q12931 704 aaKnown RBP20.71■□□□□ 0.91
SOX17-201ENST00000297316 KIAA0040Q15053 153 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 AGERQ15109 404 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 IRGCQ6NXR0 463 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 SUSD1Q6UWL2 747 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 RNF175Q8N4F7 328 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 FAM3CQ92520 227 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 SLCO4A1Q96BD0 722 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 TMEM74Q96NL1 305 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 NRTNQ99748 197 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 YIPF3Q9GZM5 350 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 LRTM1Q9HBL6 345 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 DNAJC11Q9NVH1 559 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 LATO43561 262 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 IGFALSP35858 605 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 TRIM23P36406 574 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 PEX19P40855 299 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 AQP4P55087 323 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 MRPS21P82921 87 aaKnown RBP20.71■□□□□ 0.91
SOX17-201ENST00000297316 CCINQ13939 588 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 IMPG1Q17R60 797 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 OGFRL1Q5TC84 451 aaPredicted RBP20.71■□□□□ 0.91
SOX17-201ENST00000297316 PRMT9Q6P2P2 845 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 TTC23LQ6PF05 361 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 Q7L0L9 218 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 PDSS2Q86YH6 399 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 FAM110BQ8TC76 370 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 HM13Q8TCT9 377 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 FOPNLQ96NB1 174 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 C6orf203Q9P0P8 240 aaPredicted RBP20.71■□□□□ 0.91
SOX17-201ENST00000297316 EGFL7Q9UHF1 273 aa20.71■□□□□ 0.91
SOX17-201ENST00000297316 SCAMP1O15126 338 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 CD22P20273 847 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 GNPDA1P46926 289 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 GGTA1PQ4G0N0 100 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 Q6ZS52 159 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 LIX1Q8N485 282 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 L3MBTL4Q8NA19 623 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 PHC3Q8NDX5 983 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 SELENOMQ8WWX9 145 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 OR4K3Q96R72 315 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 KLHL4Q9C0H6 718 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 CFAP20Q9Y6A4 193 aaKnown RBP20.7■□□□□ 0.9
SOX17-201ENST00000297316 C17orf113A0A1B0GUU1 675 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 TCRBV3S1A0A5B6 114 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 SEC22BO75396 215 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 JAK1P23458 1154 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 ACSL1P33121 698 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 FOXM1Q08050 763 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 MAP7D1Q3KQU3 841 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 LRRTM4Q86VH4 590 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 AMZ2Q86W34 360 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 THOC6Q86W42 341 aaKnown RBP20.7■□□□□ 0.9
SOX17-201ENST00000297316 HORMAD1Q86X24 394 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 CCDC138Q96M89 665 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 ZDHHC5Q9C0B5 715 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 OR52A5Q9H2C5 316 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 USP22Q9UPT9 525 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 CA5BQ9Y2D0 317 aa20.7■□□□□ 0.9
SOX17-201ENST00000297316 TCRBV21S2A2A0A5A6 115 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 KRT6AP02538 564 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 KRT6BP04259 564 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 HSD17B1P14061 328 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 VARSP26640 1264 aaKnown RBP20.69■□□□□ 0.9
SOX17-201ENST00000297316 ACADLP28330 430 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 KRT6CP48668 564 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 PLIN5Q00G26 463 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 RHDQ02161 417 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 KIAA1161Q6NSJ0 714 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 KRTCAP2Q8N6L1 136 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 CLHC1Q8NHS4 586 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 DLGAP2Q9P1A6 1054 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 NEUROG3Q9Y4Z2 214 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 RPL10P27635 214 aaKnown RBP20.69■□□□□ 0.9
SOX17-201ENST00000297316 HALP42357 657 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 CHIT1Q13231 466 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 GRAMD1BQ3KR37 738 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 DLEU7Q6UYE1 221 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 DHFR2Q86XF0 187 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 ZNF480Q8WV37 535 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 ELOVL6Q9H5J4 265 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 TMEM45AQ9NWC5 275 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 C1orf109Q9NX04 203 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 PLAGL1Q9UM63 463 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 EIF3LQ9Y262 564 aaKnown RBP20.69■□□□□ 0.9
SOX17-201ENST00000297316 DLGAP4Q9Y2H0 992 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 PLEKHM1Q9Y4G2 1056 aa20.69■□□□□ 0.9
SOX17-201ENST00000297316 ZNF839A8K0R7 811 aa20.68■□□□□ 0.9
SOX17-201ENST00000297316 TSTA3Q13630 321 aaPredicted RBP20.68■□□□□ 0.9
SOX17-201ENST00000297316 USP39Q53GS9 565 aaKnown RBP20.68■□□□□ 0.9
SOX17-201ENST00000297316 CHST15Q7LFX5 561 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms