RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 OR2AG1Q9H205 316 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 UBE2ZQ9H832 354 aaPredicted RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 SZT2Q5T011 3432 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 LRP4O75096 1905 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 H3BQ06 376 aaPredicted RBP8.87□□□□□ -0.99
PDPN-201ENST00000294489 IL6P05231 212 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 PRPS2P11908 318 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 JUPP14923 745 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 AQP4P55087 323 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 LIPEQ05469 1076 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 ZNF33BQ06732 778 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 FBXO43Q4G163 708 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 RABL3Q5HYI8 236 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 NANOGP8Q6NSW7 305 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 TRIM74Q86UV6 250 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 CFAP206Q8IYR0 622 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 LILRA3Q8N6C8 439 aaPredicted RBP8.87□□□□□ -0.99
PDPN-201ENST00000294489 HM13Q8TCT9 377 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 SLC13A3Q8WWT9 602 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 MED8Q96G25 268 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 SCARF2Q96GP6 870 aaPredicted RBP8.87□□□□□ -0.99
PDPN-201ENST00000294489 BTBD9Q96Q07 612 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 NANOGQ9H9S0 305 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 STOX2Q9P2F5 926 aaPredicted RBP8.87□□□□□ -0.99
PDPN-201ENST00000294489 EGFL7Q9UHF1 273 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 TMED5Q9Y3A6 229 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 MGAT4DA6NG13 374 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 RNASEH2AO75792 299 aaKnown RBP8.87□□□□□ -0.99
PDPN-201ENST00000294489 KCNH1O95259 989 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 HOXB2P14652 356 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 GSK3BP49841 420 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 DGKQP52824 942 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 ADPRHP54922 357 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 DMPKQ09013 629 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 MED21Q13503 144 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 NAE1Q13564 534 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 STARD3Q14849 445 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 IRF4Q15306 451 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 SMAD2Q15796 467 aaKnown RBP8.87□□□□□ -0.99
PDPN-201ENST00000294489 XKR6Q5GH73 641 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 IER5LQ5T953 404 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 IRAK1BP1Q5VVH5 260 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 LCN8Q6JVE9 175 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 EP400NLQ6ZTU2 488 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 IFNEQ86WN2 208 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 KIAA2013Q8IYS2 634 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 LILRA2Q8N149 483 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 OR56A3Q8NH54 315 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 CMTM7Q96FZ5 175 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 OR52A5Q9H2C5 316 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 Q9H521 79 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 INTS7Q9NVH2 962 aaKnown RBP8.87□□□□□ -0.99
PDPN-201ENST00000294489 SLAMF8Q9P0V8 285 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 LIMD1Q9UGP4 676 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 PCYT1BQ9Y5K3 369 aaPredicted RBP8.87□□□□□ -0.99
PDPN-201ENST00000294489 DOCK9Q9BZ29 2069 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 MAGEA13PA6NCF6 341 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 KRT87PA6NCN2 255 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 C1orf105O95561 183 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 BCKDHAP12694 445 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 UQCRBP14927 111 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 IL10P22301 178 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 PRPH2P23942 346 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 PSMA4P25789 261 aaKnown RBP8.87□□□□□ -0.99
PDPN-201ENST00000294489 PDHA2P29803 388 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 BDKRB1P46663 353 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 NEK2P51955 445 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 PWP1Q13610 501 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 MAPKAPK3Q16644 382 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 FAM174BQ3ZCQ3 159 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 USP39Q53GS9 565 aaKnown RBP8.87□□□□□ -0.99
PDPN-201ENST00000294489 HEATR4Q86WZ0 1026 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 EME1Q96AY2 570 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 PPWD1Q96BP3 646 aaKnown RBP8.87□□□□□ -0.99
PDPN-201ENST00000294489 CGREF1Q99674 301 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 MBNL1Q9NR56 388 aaKnown RBP8.87□□□□□ -0.99
PDPN-201ENST00000294489 FBXL12Q9NXK8 326 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 SNX13Q9Y5W8 968 aa8.87□□□□□ -0.99
PDPN-201ENST00000294489 XIRP2A4UGR9 3374 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 KANSL1LA0AUZ9 987 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 ZNF839A8K0R7 811 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 SOX1O00570 391 aaPredicted RBP8.86□□□□□ -0.99
PDPN-201ENST00000294489 SLC16A8O95907 504 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 PGRP06401 933 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 ATP6V1B2P21281 511 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 IGFBP4P22692 258 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 HNF4AP41235 474 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 KIAA0040Q15053 153 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 UNC5DQ6UXZ4 953 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 DLEU7Q6UYE1 221 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 PTRH1Q86Y79 214 aaKnown RBP8.86□□□□□ -0.99
PDPN-201ENST00000294489 SPPL2CQ8IUH8 684 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 LRRC56Q8IYG6 542 aaPredicted RBP8.86□□□□□ -0.99
PDPN-201ENST00000294489 TMEM102Q8N9M5 508 aaPredicted RBP8.86□□□□□ -0.99
PDPN-201ENST00000294489 PPM1MQ96MI6 270 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 PKP4Q99569 1192 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 LGR4Q9BXB1 951 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 CLMPQ9H6B4 373 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 ARMC1Q9NVT9 282 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 GMPR2Q9P2T1 348 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms