RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ARHGAP10A1A4S6 786 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 E2F3O00716 465 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 MTX2O75431 263 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 SLC22A3O75751 556 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 SLCO2B1O94956 709 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 PGM3O95394 542 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 DCNP07585 359 aaKnown RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 CYP2A7P20853 494 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 BOP1Q14137 746 aaKnown RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 RBBP7Q16576 425 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 C11orf91Q3C1V1 193 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 TMEM220Q6QAJ8 160 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 ZBTB49Q6ZSB9 765 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 SNX31Q8N9S9 440 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 PAPD5Q8NDF8 572 aaKnown RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 PJA1Q8NG27 643 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 OR14C36Q8NHC7 312 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 RPLP0P6Q8NHW5 317 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 HM13Q8TCT9 377 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 ASB12Q8WXK4 309 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 GLMNQ92990 594 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 PPWD1Q96BP3 646 aaKnown RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 LINC00615Q96LM1 132 aaPredicted RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 C9orf16Q9BUW7 83 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 LTB4R2Q9NPC1 389 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 SIT1Q9Y3P8 196 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 ST14Q9Y5Y6 855 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 WDFY4Q6ZS81 3184 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 EME2A4GXA9 379 aaPredicted RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 OR2AG2A6NM03 316 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 FAM170BA6NMN3 283 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 AKAP10O43572 662 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 SGTAO43765 313 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 H6PDO95479 791 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 ANXA5P08758 320 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 FASP25445 335 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 ZFP36L2P47974 494 aaKnown RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 TUBA4AP68366 448 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 NFYCQ13952 458 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 SMU1Q2TAY7 513 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 NADK2Q4G0N4 442 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 TBCELQ5QJ74 424 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 DPP10Q8N608 796 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 SKA2Q8WVK7 121 aaPredicted RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 CENPNQ96H22 339 aaPredicted RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 FOPNLQ96NB1 174 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 PRPF18Q99633 342 aaKnown RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 C1QTNF2Q9BXJ5 285 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 SLC12A9Q9BXP2 914 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 SEMA6AQ9H2E6 1030 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 NOL11Q9H8H0 719 aaKnown RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 PARVBQ9HBI1 364 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 POLMQ9NP87 494 aaPredicted RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 RNF11Q9Y3C5 154 aa16.34■□□□□ 0.21
CPSF4-201ENST00000292476 DNMT3AQ9Y6K1 912 aaPredicted RBP16.34■□□□□ 0.21
CPSF4-201ENST00000292476 CCDC154A6NI56 674 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 NCF1BA6NI72 391 aaPredicted RBP16.33■□□□□ 0.2
CPSF4-201ENST00000292476 NCF1CA8MVU1 366 aaPredicted RBP16.33■□□□□ 0.2
CPSF4-201ENST00000292476 ARPC2O15144 300 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 TIPRLO75663 272 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 NCF1P14598 390 aaPredicted RBP16.33■□□□□ 0.2
CPSF4-201ENST00000292476 PIK3CGP48736 1102 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 HNMTP50135 292 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 POLR2JP52435 117 aaKnown RBP16.33■□□□□ 0.2
CPSF4-201ENST00000292476 HK3P52790 923 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 AP1S2P56377 157 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 LRRC32Q14392 662 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 NRF1Q16656 503 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 NHSL2Q5HYW2 709 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 HORMAD1Q86X24 394 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 CACUL1Q86Y37 369 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 ADGRG5Q8IZF4 528 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 TRPV3Q8NET8 790 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 MCOLN3Q8TDD5 553 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 ERLEC1Q96DZ1 483 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 DTNBP1Q96EV8 351 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 COX14Q96I36 57 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 EGFL8Q99944 293 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 TUBA8Q9NY65 449 aaPredicted RBP16.33■□□□□ 0.2
CPSF4-201ENST00000292476 GIMAP2Q9UG22 337 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 ZNF225Q9UK10 706 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 HCN4Q9Y3Q4 1203 aa16.33■□□□□ 0.2
CPSF4-201ENST00000292476 TBC1D3DA0A087WVF3 549 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 TBC1D3IA0A087WXS9 549 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 TBC1D3EA0A087X179 549 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 TBC1D3KA0A087X1G2 549 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 A0A1B0GTL3 188 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 TBC1D3FA6NER0 549 aaPredicted RBP16.32■□□□□ 0.2
CPSF4-201ENST00000292476 TBC1D3LB9A6J9 549 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 H3BNH8 94 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 VILLO15195 856 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 TBC1D3HP0C7X1 549 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 ZNF23P17027 643 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 HTR1EP28566 365 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 RPIAP49247 311 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 AGTR2P50052 363 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 ADPRHP54922 357 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 DIO3P55073 304 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 NME5P56597 212 aa16.32■□□□□ 0.2
CPSF4-201ENST00000292476 WSCD2Q2TBF2 565 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms