RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CDADC1Q9BWV3 514 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 NUAK2Q9H093 628 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 RAD18Q9NS91 495 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 EHD3Q9NZN3 535 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 MARCH2Q9P0N8 246 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 PRG3Q9Y2Y8 225 aaPredicted RBP12.59□□□□□ -0.39
COL8A1-202ENST00000273342 PCDHGB1Q9Y5G3 927 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 DOCK3Q8IZD9 2030 aa12.58□□□□□ -0.39
COL8A1-202ENST00000273342 TNS1Q9HBL0 1735 aaKnown RBP12.58□□□□□ -0.4
COL8A1-202ENST00000273342 METTL15A6NJ78 407 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 M0QX08 132 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 TAPBPO15533 448 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 NTRK1P04629 796 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 CA5AP35218 305 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 CTSKP43235 329 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 TAB1Q15750 504 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 RFX4Q33E94 735 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 ENTHD1Q8IYW4 607 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 ZNF683Q8IZ20 524 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 LKAAEAR1Q8TD35 194 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 SKA2Q8WVK7 121 aaPredicted RBP12.58□□□□□ -0.4
COL8A1-202ENST00000273342 SLC38A4Q969I6 547 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 PRRG3Q9BZD7 231 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 AASDHPPTQ9NRN7 309 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 LOC285556D6RIA3 1793 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 ZSWIM8A7E2V4 1837 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 RFXANKO14593 260 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 KLK8O60259 260 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 DNAJB5O75953 348 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 LPOP22079 712 aaPredicted RBP12.58□□□□□ -0.4
COL8A1-202ENST00000273342 OR2B6P58173 313 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 BCL7AQ4VC05 210 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 SBSNQ6UWP8 590 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 GALNT13Q8IUC8 556 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 CACTIN-AS1Q8N1I8 211 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 CCSER2Q9H7U1 834 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 SP140LQ9H930 580 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 TRIM39Q9HCM9 518 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 EXOSC4Q9NPD3 245 aaKnown RBP12.58□□□□□ -0.4
COL8A1-202ENST00000273342 CCL27Q9Y4X3 112 aa12.58□□□□□ -0.4
COL8A1-202ENST00000273342 KMOO15229 486 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 PRAMEF11O60813 436 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 OPN1SWP03999 348 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 ALPIP09923 528 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 NPRL3Q12980 569 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 KIAA1614Q5VZ46 1190 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 KDM4DQ6B0I6 523 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 CAPN13Q6MZZ7 669 aaPredicted RBP12.57□□□□□ -0.4
COL8A1-202ENST00000273342 C16orf59Q7L2K0 433 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 PRSS48Q7RTY5 328 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 LILRB4Q8NHJ6 448 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 APH1BQ8WW43 257 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 MAL2Q969L2 176 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 SLC39A13Q96H72 371 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 SH3GL1Q99961 368 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 TRIM62Q9BVG3 475 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 MMP27Q9H306 513 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 THUMPD1Q9NXG2 353 aaKnown RBP12.57□□□□□ -0.4
COL8A1-202ENST00000273342 FAM8A1Q9UBU6 413 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 SLC6A14Q9UN76 642 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 NOTOA8MTQ0 251 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 M0QZ92 97 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 PRLP01236 227 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 IL6P05231 212 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 FABP3P05413 133 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 RETP07949 1114 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 NUDT7P0C024 238 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 ITGAMP11215 1152 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 JUNDP17535 347 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 CD52P31358 61 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 CAMK2GQ13555 558 aaPredicted RBP12.57□□□□□ -0.4
COL8A1-202ENST00000273342 SNAP47Q5SQN1 464 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 CXCL17Q6UXB2 119 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 ANGPTL8Q6UXH0 198 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 SNX20Q7Z614 316 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 NRARPQ7Z6K4 114 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 MON1AQ86VX9 555 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 AMER2Q8N7J2 671 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 ZNF566Q969W8 418 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 HSH2DQ96JZ2 352 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 CEP19Q96LK0 163 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 APOLD1Q96LR9 279 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 C1orf74Q96LT6 269 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 C1QTNF3Q9BXJ4 246 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 ZNF221Q9UK13 617 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 NOD1Q9Y239 953 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 PCDHGB6Q9Y5F9 930 aa12.57□□□□□ -0.4
COL8A1-202ENST00000273342 CHRM5P08912 532 aaPredicted RBP12.56□□□□□ -0.4
COL8A1-202ENST00000273342 SLC10A3P09131 477 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 PPP3CCP48454 512 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 TGM4P49221 684 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 TTPAP49638 278 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 ATAD3CQ5T2N8 411 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 TMEM132CQ8N3T6 1108 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 FBXO32Q969P5 355 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 TRIB3Q96RU7 358 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 BBS2Q9BXC9 721 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 CLMPQ9H6B4 373 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 REEP1Q9H902 201 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 TMEM184CQ9NVA4 438 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms