RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 EOMESO95936 686 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 GLUD1P00367 558 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 MYL9P24844 172 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 PLA2G16P53816 162 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 INHBCP55103 352 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 MANFP55145 182 aaKnown RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 AP1S1P61966 158 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 MVKQ03426 396 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 TCEA2Q15560 299 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 C6orf136Q5SQH8 315 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ARL14EPQ8N8R7 260 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ANKRA2Q9H9E1 313 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ASAH2Q9NR71 780 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 FNIP2Q9P278 1114 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 GMPR2Q9P2T1 348 aaKnown RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 CD84Q9UIB8 345 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 CNOT11Q9UKZ1 510 aaKnown RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 COL22A1Q8NFW1 1626 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 BTAF1O14981 1849 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 H0YAE9 185 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 GADD45GO95257 159 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 PAPSS2O95340 614 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ALPIP09923 528 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 BMP2P12643 396 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 CAPN3P20807 821 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 RORCP51449 518 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 WSCD2Q2TBF2 565 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 IKBIPQ70UQ0 350 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ZNF597Q96LX8 424 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ZFP3Q96NJ6 502 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 RNF208Q9H0X6 261 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 MARCH4Q9P2E8 410 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 MAGED1Q9Y5V3 778 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ZBTB42B2RXF5 422 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 H0YJX3 145 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 CCNB2O95067 398 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 CCNYL3P0C7X3 344 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ARSAP15289 507 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 HOXB6P17509 224 aaKnown RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 LEPRP48357 1165 aaKnown RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ARSDP51689 593 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 TXNL4AP83876 142 aaKnown RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 E2F2Q14209 437 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 IQCCQ4KMZ1 466 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 RAET1GQ6H3X3 334 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 MEIOBQ8N635 442 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 PSD4Q8NDX1 1056 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 TEFMQ96QE5 360 aaKnown RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 SLC30A2Q9BRI3 323 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 THUMPD1Q9NXG2 353 aaKnown RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 SCML2Q9UQR0 700 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 DNAJC15Q9Y5T4 150 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 FAM92AA1XBS5 289 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 GSAPA4D1B5 854 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ARHGEF33A8MVX0 844 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ANKRD66B4E2M5 251 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 PLOD2O00469 737 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 ENGP17813 658 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 RCVRNP35243 200 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 GPR1P46091 355 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 C2orf80Q0P641 193 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 HKDC1Q2TB90 917 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 UNC50Q53HI1 259 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 DCST1Q5T197 706 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 GCNT6Q5T4J0 391 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 LYSMD3Q7Z3D4 306 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 HS3ST5Q8IZT8 346 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 TMEM199Q8N511 208 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 TFAP2CQ92754 450 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 TUBA1CQ9BQE3 449 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 TTYH1Q9H313 450 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 MRM3Q9HC36 420 aaKnown RBP11.28□□□□□ -0.6
VPS33A-201ENST00000267199 PCDHGA3Q9Y5H0 932 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 CPQQ9Y646 472 aa11.28□□□□□ -0.6
VPS33A-201ENST00000267199 DNAJC25-GNG10A0A024R161 153 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 ISPDA4D126 451 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 ERN1O75460 977 aaKnown RBP11.27□□□□□ -0.6
VPS33A-201ENST00000267199 RFPL2O75678 378 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 SELPP16109 830 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 STAT5AP42229 794 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 SMIM11AP58511 58 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 DCDC1P59894 354 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 CD47Q08722 323 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 IFI44LQ53G44 452 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 PIK3R6Q5UE93 754 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 UBE2UQ5VVX9 321 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 PLEKHG7Q6ZR37 379 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 MTSS1LQ765P7 747 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 PGBD3Q8N328 593 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 ACVR1CQ8NER5 493 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 OR10T2Q8NGX3 314 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 IMP4Q96G21 291 aaKnown RBP11.27□□□□□ -0.6
VPS33A-201ENST00000267199 C8orf48Q96LL4 319 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 ZNF599Q96NL3 588 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 FCRL4Q96PJ5 515 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 IL12RB2Q99665 862 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 CHIAQ9BZP6 476 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 NSUN3Q9H649 340 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms