RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SPATA9Q9BWV2 254 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 FAM83DQ9H4H8 585 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 ALG9Q9H6U8 611 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 GALNT9Q9HCQ5 603 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 EIF2B3Q9NR50 452 aaKnown RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 MCUBQ9NWR8 336 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 USE1Q9NZ43 259 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 COL1A2P08123 1366 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SYNJ2BP-COX16A0A087WUM0 186 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 TMEM88BA6NKF7 163 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 PLOD3O60568 738 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 PAPSS2O95340 614 aaPredicted RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 PTHP01270 115 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 VIPP01282 170 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 RPL17P18621 184 aaKnown RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 ATF6P18850 670 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 DNAJB2P25686 324 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 DGKQP52824 942 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SRP54P61011 504 aaKnown RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 EMX2Q04743 252 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 KRR1Q13601 381 aaKnown RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 MAD2L1BPQ15013 274 aaPredicted RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 DPYSL2Q16555 572 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 TATDN3Q17R31 274 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.56□□□□□ -1.044e-6■■□□□ 13.8
VAPB-201ENST00000265619 DLEU7Q6UYE1 221 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 DGLUCYQ7Z3D6 616 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 C16orf62Q7Z3J2 963 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 FAM131BQ86XD5 332 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 LIX1LQ8IVB5 337 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 TAGAPQ8N103 731 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 DCBLD1Q8N8Z6 715 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 ZNF680Q8NEM1 530 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 CLHC1Q8NHS4 586 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SLC2A14Q8TDB8 520 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 GTF3C2Q8WUA4 911 aaPredicted RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 ST8SIA4Q92187 359 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 LPPQ93052 612 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SLC47A1Q96FL8 570 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 GFM1Q96RP9 751 aaKnown RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 ACTR8Q9H981 624 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SLAMF7Q9NQ25 335 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 COX16Q9P0S2 106 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 DNAJB9Q9UBS3 223 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 RAPGEFL1Q9UHV5 662 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 CLCA3PQ9Y6N3 262 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 RPS10-NUDT3A0A1W2PQS6 291 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 SMIM30A4D0T7 59 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 ARHGEF9O43307 516 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 C1QBP02746 253 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 C1QCP02747 245 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 ALPPP05187 535 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 PRKAR2AP13861 404 aaKnown RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 CCND3P30281 292 aaPredicted RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 PSEN2P49810 448 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 PER3P56645 1201 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 RGS1Q08116 209 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 SREBF2Q12772 1141 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 SEMA3BQ13214 749 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 RPS6KA2Q15349 733 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 ZNF667Q5HYK9 610 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 NADSYN1Q6IA69 706 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 LDB1Q86U70 411 aaPredicted RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 PIM3Q86V86 326 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 RDH10Q8IZV5 341 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 BMPERQ8N8U9 685 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 USP7Q93009 1102 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 EMID1Q96A84 441 aaPredicted RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 CELF6Q96J87 481 aaKnown RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 CAPNS2Q96L46 248 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 ZNF583Q96ND8 569 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 MID1IP1Q9NPA3 183 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 FANCFQ9NPI8 374 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 SIX4Q9UIU6 781 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 TPRKBQ9Y3C4 175 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 PEX16Q9Y5Y5 336 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 PIPSLA2A3N6 862 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 CCDC182A6NF36 153 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 FAM25EA8MYX2 175 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 PPEF2O14830 753 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 MDM4O15151 490 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 SIGLEC5O15389 551 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 PROS1P07225 676 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 ANXA6P08133 673 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 ITGALP20701 1170 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 ALAS2P22557 587 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 PTPN3P26045 913 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 RPS5P46782 204 aaKnown RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 PPP3CCP48454 512 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 EPHA5P54756 1037 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 EEFSECP57772 596 aaKnown RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 ERVK-21P61565 698 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 SIGLEC14Q08ET2 396 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 RCAN2Q14206 197 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 NFE2L1Q14494 772 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 ZNF678Q5SXM1 525 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 TEX261Q6UWH6 196 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 KDELC2Q7Z4H8 507 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 ANKRD53Q8N9V6 530 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 TMEM40Q8WWA1 233 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms