RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SH3GL1Q99961 368 aa9.05□□□□□ -0.96
SSR3-201ENST00000265044 APOOQ9BUR5 198 aa9.05□□□□□ -0.96
SSR3-201ENST00000265044 COPS7BQ9H9Q2 264 aaPredicted RBP9.05□□□□□ -0.96
SSR3-201ENST00000265044 SNX8Q9Y5X2 465 aa9.05□□□□□ -0.96
SSR3-201ENST00000265044 CHD5Q8TDI0 1954 aa9.05□□□□□ -0.96
SSR3-201ENST00000265044 PLXNA4Q9HCM2 1894 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 RFXANKO14593 260 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 NARSO43776 548 aaKnown RBP9.04□□□□□ -0.96
SSR3-201ENST00000265044 FKBP9O95302 570 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 STATHP02808 62 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 PSMA4P25789 261 aaKnown RBP9.04□□□□□ -0.96
SSR3-201ENST00000265044 PTDSS1P48651 473 aaKnown RBP9.04□□□□□ -0.96
SSR3-201ENST00000265044 CLNS1AP54105 237 aaKnown RBP9.04□□□□□ -0.96
SSR3-201ENST00000265044 PNLIPRP1P54315 467 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 INHBCP55103 352 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 EMX2Q04743 252 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 TUBB3Q13509 450 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 TMEM184AQ6ZMB5 413 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 FKBP9P1Q75LS8 142 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 ZNF765Q7L2R6 523 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 PLD3Q8IV08 490 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 OR4E2Q8NGC2 313 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 UTP4Q969X6 686 aaKnown RBP9.04□□□□□ -0.96
SSR3-201ENST00000265044 HOPXQ9BPY8 73 aaPredicted RBP9.04□□□□□ -0.96
SSR3-201ENST00000265044 SLC29A3Q9BZD2 475 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 OR51B5Q9H339 312 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 FBRSQ9HAH7 460 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 TRPS1Q9UHF7 1281 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 TMPRSS11EQ9UL52 423 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 ACSL5Q9ULC5 683 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 SCML1Q9UN30 329 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 GPR34Q9UPC5 381 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 H7BY64 318 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 OR7A17O14581 309 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 CDH1P12830 882 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 XRCC1P18887 633 aaPredicted RBP9.04□□□□□ -0.96
SSR3-201ENST00000265044 GPC1P35052 558 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 DRD3P35462 400 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 KIR3DL1P43629 444 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 TRAF3Q13114 568 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 KCNC3Q14003 757 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 HERC3Q15034 1050 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 AGBL4Q5VU57 503 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 SLC2A7Q6PXP3 512 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 RNF175Q8N4F7 328 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 C1orf52Q8N6N3 182 aaKnown RBP9.04□□□□□ -0.96
SSR3-201ENST00000265044 OR2L2Q8NH16 312 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 ZNF480Q8WV37 535 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 FBXL8Q96CD0 374 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 NSMCE2Q96MF7 247 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 PRAP1Q96NZ9 151 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 C19orf43Q9BQ61 176 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 TMEM79Q9BSE2 394 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 EFCAB11Q9BUY7 163 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 TUBB1Q9H4B7 451 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 SYNDIG1Q9H7V2 258 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 C15orf38-AP3S2A0A0A6YYH1 394 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 AGRPO00253 132 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 SLCO2B1O94956 709 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 ALDOCP09972 364 aaKnown RBP9.04□□□□□ -0.96
SSR3-201ENST00000265044 PLA2G16P53816 162 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 RPS13P62277 151 aaKnown RBP9.04□□□□□ -0.96
SSR3-201ENST00000265044 C1orf61Q13536 156 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 SPANXN4Q5MJ08 99 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 CATSPEREQ5SY80 951 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 TMIGD1Q6UXZ0 262 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 LRRC74BQ6ZQY2 392 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 ARPINQ7Z6K5 226 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 SLC5A11Q8WWX8 675 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 SMPDL3AQ92484 453 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 SHDQ96IW2 340 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 MAGED4Q96JG8 741 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 WDR92Q96MX6 357 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 OR2M4Q96R27 311 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 SEMA6AQ9H2E6 1030 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 WDR70Q9NW82 654 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 SUFUQ9UMX1 484 aa9.04□□□□□ -0.96
SSR3-201ENST00000265044 FAM234BA2RU67 622 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 FAM170BA6NMN3 283 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 SORBS2O94875 1100 aaKnown RBP9.03□□□□□ -0.96
SSR3-201ENST00000265044 C1orf105O95561 183 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 PRPS2P11908 318 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 MYCLP1P12525 358 aaPredicted RBP9.03□□□□□ -0.96
SSR3-201ENST00000265044 AMD1P17707 334 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 HNRNPA2B1P22626 353 aaKnown RBP9.03□□□□□ -0.96
SSR3-201ENST00000265044 AK4P27144 223 aaPredicted RBP9.03□□□□□ -0.96
SSR3-201ENST00000265044 HPCAL1P37235 193 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 PRIM2P49643 509 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 ADPRHP54922 357 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 ADGRE1Q14246 886 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 TBCELQ5QJ74 424 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 NEK5Q6P3R8 708 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 CHSY3Q70JA7 882 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 Q7L0L9 218 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 FAM46DQ8NEK8 389 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 SLC13A3Q8WWT9 602 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 NEIL2Q969S2 332 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 TOE1Q96GM8 510 aaKnown RBP9.03□□□□□ -0.96
SSR3-201ENST00000265044 MRGPRX1Q96LB2 322 aa9.03□□□□□ -0.96
SSR3-201ENST00000265044 HAUS8Q9BT25 410 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms