RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 KLRB1Q12918 225 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 CHAF1BQ13112 559 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 FASTKQ14296 549 aaKnown RBP15.42■□□□□ 0.06
USE1-201ENST00000263897 SSPNQ14714 243 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 ARHGAP19Q14CB8 494 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.42■□□□□ 0.06
USE1-201ENST00000263897 TCTE1Q5JU00 501 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 CPZQ66K79 652 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 CYHR1Q6ZMK1 362 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 CREG2Q8IUH2 290 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 GIMAP7Q8NHV1 300 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 ASB11Q8WXH4 323 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 DLG3Q92796 817 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 INPP5DQ92835 1189 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 EBNA1BP2Q99848 306 aaKnown RBP15.42■□□□□ 0.06
USE1-201ENST00000263897 FAM167BQ9BTA0 163 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 CLMPQ9H6B4 373 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 MLXIPLQ9NP71 852 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 FAM114A2Q9NRY5 505 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 IFT80Q9P2H3 777 aaPredicted RBP15.42■□□□□ 0.06
USE1-201ENST00000263897 PCDHGA9Q9Y5G4 932 aaKnown RBP15.42■□□□□ 0.06
USE1-201ENST00000263897 HEATR5BQ9P2D3 2071 aa15.42■□□□□ 0.06
USE1-201ENST00000263897 MYO1CO00159 1063 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 TTC4O95801 387 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 ONECUT2O95948 504 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 PDGFAP04085 211 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 MPC1LP0DKB6 136 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 HSD17B2P37059 387 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 YBX1P67809 324 aaKnown RBP15.41■□□□□ 0.06
USE1-201ENST00000263897 MPP1Q00013 466 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 DHX9Q08211 1270 aaKnown RBP15.41■□□□□ 0.06
USE1-201ENST00000263897 GRM7Q14831 915 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 CRYMQ14894 314 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 MSS51Q4VC12 460 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 YOD1Q5VVQ6 348 aaPredicted RBP15.41■□□□□ 0.06
USE1-201ENST00000263897 MRPL14Q6P1L8 145 aaKnown RBP15.41■□□□□ 0.06
USE1-201ENST00000263897 TTLL10Q6ZVT0 673 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 SYDE1Q6ZW31 735 aaPredicted RBP15.41■□□□□ 0.06
USE1-201ENST00000263897 MED25Q71SY5 747 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 KCNMB4Q86W47 210 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 RAB43Q86YS6 212 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 TMEM102Q8N9M5 508 aaPredicted RBP15.41■□□□□ 0.06
USE1-201ENST00000263897 TEX19Q8NA77 164 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 FBXO15Q8NCQ5 510 aaPredicted RBP15.41■□□□□ 0.06
USE1-201ENST00000263897 SMPDL3AQ92484 453 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 PTERQ96BW5 349 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 CAPZA3Q96KX2 299 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 IP6K3Q96PC2 410 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 PKP4Q99569 1192 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 GPR21Q99679 349 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 SELENOSQ9BQE4 189 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 NAT9Q9BTE0 207 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 SLC25A23Q9BV35 468 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 EPN3Q9H201 632 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 SLC22A11Q9NSA0 550 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 IARS2Q9NSE4 1012 aaKnown RBP15.41■□□□□ 0.06
USE1-201ENST00000263897 NDOR1Q9UHB4 597 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 PTRH2Q9Y3E5 179 aaKnown RBP15.41■□□□□ 0.06
USE1-201ENST00000263897 SAR1BQ9Y6B6 198 aa15.41■□□□□ 0.06
USE1-201ENST00000263897 TNRC6AQ8NDV7 1962 aaKnown RBP15.41■□□□□ 0.06
USE1-201ENST00000263897 RP1L1Q8IWN7 2480 aaPredicted RBP15.4■□□□□ 0.06
USE1-201ENST00000263897 FITM1A5D6W6 292 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 GFYI3L273 518 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 CNOT3O75175 753 aaKnown RBP15.4■□□□□ 0.06
USE1-201ENST00000263897 BANF1O75531 89 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 CEACAM4O75871 244 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 ATXN8OSP0DMR3 200 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 ERVK-10P10266 1014 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 ENO3P13929 434 aaPredicted RBP15.4■□□□□ 0.06
USE1-201ENST00000263897 MCM3P25205 808 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 CMPK1P30085 196 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 FOLR3P41439 243 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 RRADP55042 308 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 CUL1Q13616 776 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 SLC9A5Q14940 896 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 FAM214AQ32MH5 1076 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 WASHC2DQ5SRD0 308 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 FBXO42Q6P3S6 717 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 SUSD1Q6UWL2 747 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 IGDCC3Q8IVU1 814 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 SPNS2Q8IVW8 549 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 KLHL7Q8IXQ5 586 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 C2CD4AQ8NCU7 369 aaPredicted RBP15.4■□□□□ 0.06
USE1-201ENST00000263897 OR2Y1Q8NGV0 311 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 NAPGQ99747 312 aaPredicted RBP15.4■□□□□ 0.06
USE1-201ENST00000263897 AARSD1Q9BTE6 412 aaKnown RBP15.4■□□□□ 0.06
USE1-201ENST00000263897 DPH7Q9BTV6 452 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 ACAT2Q9BWD1 397 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 CUTCQ9NTM9 273 aa15.4■□□□□ 0.06
USE1-201ENST00000263897 SETXQ7Z333 2677 aaKnown RBP15.4■□□□□ 0.06
USE1-201ENST00000263897 LOC105369274A0A096LPK9 316 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 LOC102723532A0A0G2JNH3 316 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 A0A0J9YVX5 310 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 A0A1B0GX78 115 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 OR2A25A4D2G3 310 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 ZNF839A8K0R7 811 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 DSCR3O14972 297 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 ZBTB14O43829 449 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 VPS26AO75436 327 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 SLC16A8O95907 504 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms