RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 SNAP47Q5SQN1 464 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 CES4AQ5XG92 561 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 LRRC8EQ6NSJ5 796 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 CCDC121Q6ZUS5 278 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 TBC1D1Q86TI0 1168 aaPredicted RBP12.94□□□□□ -0.34
SGCA-201ENST00000262018 TSPAN33Q86UF1 283 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 C17orf82Q86X59 251 aaPredicted RBP12.94□□□□□ -0.34
SGCA-201ENST00000262018 C10orf107Q8IVU9 208 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.94□□□□□ -0.34
SGCA-201ENST00000262018 UBXN10Q96LJ8 280 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 C5orf34Q96MH7 638 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 GPAMQ9HCL2 828 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 APMAPQ9HDC9 416 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 KCTD5Q9NXV2 234 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 KLHL14Q9P2G3 628 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 ARL2BPQ9Y2Y0 163 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 TMEM184BQ9Y519 407 aaPredicted RBP12.94□□□□□ -0.34
SGCA-201ENST00000262018 COMMD10Q9Y6G5 202 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 IGHV1OR21-1A0A087WYE8 117 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 TRBV5-4A0A0C4DH59 114 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 KATNA1O75449 491 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 SRP72O76094 671 aaKnown RBP12.93□□□□□ -0.34
SGCA-201ENST00000262018 SERPINE1P05121 402 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 GRK2P25098 689 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 FMO4P31512 558 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 DLSTP36957 453 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 SPAM1P38567 509 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 PRKAA2P54646 552 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 KIAA1024LP59773 190 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 FAM83EQ2M2I3 478 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 AGAP9Q5VTM2 703 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 ZDHHC20Q5W0Z9 365 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 LRRC66Q68CR7 880 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 TMEM71Q6P5X7 295 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 TMEM207Q6UWW9 146 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 ZYG11AQ6WRX3 759 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 CERS6Q6ZMG9 384 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 SNX20Q7Z614 316 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 RAVER1Q8IY67 606 aaKnown RBP12.93□□□□□ -0.34
SGCA-201ENST00000262018 ESX1Q8N693 406 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 PLA2G15Q8NCC3 412 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 ZNF398Q8TD17 642 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 HEXDCQ8WVB3 486 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 PATE1Q8WXA2 126 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 FUBP1Q96AE4 644 aaKnown RBP12.93□□□□□ -0.34
SGCA-201ENST00000262018 RNF31Q96EP0 1072 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 SCYL1Q96KG9 808 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 DPYSL5Q9BPU6 564 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 MRPL57Q9BQC6 102 aaKnown RBP12.93□□□□□ -0.34
SGCA-201ENST00000262018 ZPBPQ9BS86 351 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 CCDC68Q9H2F9 335 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 FAM96AQ9H5X1 160 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 IL26Q9NPH9 171 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 THAP1Q9NVV9 213 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 LUZP4Q9P127 313 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 KCND3Q9UK17 655 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 SLC5A6Q9Y289 635 aa12.93□□□□□ -0.34
SGCA-201ENST00000262018 TNRC6AQ8NDV7 1962 aaKnown RBP12.93□□□□□ -0.34
SGCA-201ENST00000262018 NF1P21359 2839 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 GLYATL1P3A0A0U1RQE8 302 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 UBA6A0AVT1 1052 aaPredicted RBP12.92□□□□□ -0.34
SGCA-201ENST00000262018 INPP4BO15327 924 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 DNAJC6O75061 913 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 H2AFYO75367 372 aaKnown RBP12.92□□□□□ -0.34
SGCA-201ENST00000262018 PRAMEF1O95521 474 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 DLGAP3O95886 979 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 CCDC166P0CW27 439 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 TROVE2P10155 538 aaKnown RBP eCLIP12.92□□□□□ -0.34
SGCA-201ENST00000262018 MYL2P10916 166 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 RALBP11234 206 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 PKMP14618 531 aaKnown RBP12.92□□□□□ -0.34
SGCA-201ENST00000262018 ITGALP20701 1170 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 KELP23276 732 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 RPS3P23396 243 aaKnown RBP eCLIP12.92□□□□□ -0.34
SGCA-201ENST00000262018 PPARGP37231 505 aaPredicted RBP12.92□□□□□ -0.34
SGCA-201ENST00000262018 PGDP52209 483 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 PTSQ03393 145 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 CSHL1Q14406 222 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 ACOX1Q15067 660 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 GPR33Q49SQ1 333 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 TECRLQ5HYJ1 363 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 SPDYAQ5MJ70 313 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 LYPLAL1Q5VWZ2 237 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 FAM151BQ6UXP7 276 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 TAS2R42Q7RTR8 314 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 PPP1R14CQ8TAE6 165 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 ANKRD49Q8WVL7 239 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 SREK1Q8WXA9 508 aaKnown RBP12.92□□□□□ -0.34
SGCA-201ENST00000262018 COQ10AQ96MF6 247 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 BIRC8Q96P09 236 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 TRIM55Q9BYV6 548 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 P2RY12Q9H244 342 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 MRPL46Q9H2W6 279 aaKnown RBP12.92□□□□□ -0.34
SGCA-201ENST00000262018 OXSMQ9NWU1 459 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 XPR1Q9UBH6 696 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 CROTQ9UKG9 612 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 MED16Q9Y2X0 877 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 APCP25054 2843 aa12.92□□□□□ -0.34
SGCA-201ENST00000262018 PRRC2CQ9Y520 2896 aaKnown RBP12.92□□□□□ -0.34
SGCA-201ENST00000262018 AGAP14A8MT82 685 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms