RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 MPP7Q5T2T1 576 aa22■■□□□ 1.11
MCF2L-201ENST00000261963 DDX53Q86TM3 631 aaKnown RBP22■■□□□ 1.11
MCF2L-201ENST00000261963 OR8J3Q8NGG0 315 aa22■■□□□ 1.11
MCF2L-201ENST00000261963 GTF2H4Q92759 462 aa22■■□□□ 1.11
MCF2L-201ENST00000261963 AURKBQ96GD4 344 aaPredicted RBP22■■□□□ 1.11
MCF2L-201ENST00000261963 ZNF486Q96H40 463 aaPredicted RBP22■■□□□ 1.11
MCF2L-201ENST00000261963 BCL7BQ9BQE9 202 aa22■■□□□ 1.11
MCF2L-201ENST00000261963 LATS2Q9NRM7 1088 aa22■■□□□ 1.11
MCF2L-201ENST00000261963 TRPS1Q9UHF7 1281 aa22■■□□□ 1.11
MCF2L-201ENST00000261963 PCDHGA8Q9Y5G5 932 aa22■■□□□ 1.11
MCF2L-201ENST00000261963 B4GALNT1Q00973 533 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 HIST2H2ACQ16777 129 aaPredicted RBP21.99■■□□□ 1.11
MCF2L-201ENST00000261963 MPPE1Q53F39 396 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 CNKSR3Q6P9H4 555 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 RFLNAQ6ZTI6 216 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 ARMCX6Q7L4S7 300 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 Q8N9G6 341 aaPredicted RBP21.99■■□□□ 1.11
MCF2L-201ENST00000261963 CHDHQ8NE62 594 aaPredicted RBP21.99■■□□□ 1.11
MCF2L-201ENST00000261963 ZNF296Q8WUU4 475 aaPredicted RBP21.99■■□□□ 1.11
MCF2L-201ENST00000261963 ABCG8Q9H221 673 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 SP140LQ9H930 580 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 NTN4Q9HB63 628 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 ZNF490Q9ULM2 529 aaPredicted RBP21.99■■□□□ 1.11
MCF2L-201ENST00000261963 EIF3LQ9Y262 564 aaKnown RBP21.99■■□□□ 1.11
MCF2L-201ENST00000261963 ZNF99A8MXY4 864 aaPredicted RBP21.99■■□□□ 1.11
MCF2L-201ENST00000261963 SLC28A1O00337 649 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 MANBAO00462 879 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 RGS13O14921 159 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 ULK1O75385 1050 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 WDR47O94967 919 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 GABARAPO95166 117 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 EBLN1P0CF75 366 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 SRCP12931 536 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 GGT1P19440 569 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 TLE2Q04725 743 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 MEP1AQ16819 746 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 SMU1Q2TAY7 513 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 FAM174BQ3ZCQ3 159 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 SGO1Q5FBB7 561 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 LRRC66Q68CR7 880 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 STK32CQ86UX6 486 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 RGL4Q8IZJ4 473 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 LMLNQ96KR4 655 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 TOR3AQ9H497 397 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 ZFP14Q9HCL3 533 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 SPG21Q9NZD8 308 aa21.99■■□□□ 1.11
MCF2L-201ENST00000261963 UPK1AO00322 258 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 ASNA1O43681 348 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 EPORP19235 508 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 SLC7A9P82251 487 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 TOP3AQ13472 1001 aaPredicted RBP21.98■■□□□ 1.11
MCF2L-201ENST00000261963 CRY1Q16526 586 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 SUSD1Q6UWL2 747 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 TMC8Q8IU68 726 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 MSRB3Q8IXL7 192 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 LIX1Q8N485 282 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 KRTCAP2Q8N6L1 136 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 NDNFQ8TB73 568 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 MRPS31Q92665 395 aaKnown RBP21.98■■□□□ 1.11
MCF2L-201ENST00000261963 TMBIM1Q969X1 311 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 IKZF5Q9H5V7 419 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 PAK6Q9NQU5 681 aaPredicted RBP21.98■■□□□ 1.11
MCF2L-201ENST00000261963 EPB42P16452 691 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 LHCGRP22888 699 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 NSG1P42857 185 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 NR4A2P43354 598 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 GNPDA1P46926 289 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 NKX2-5P52952 324 aaPredicted RBP21.98■■□□□ 1.11
MCF2L-201ENST00000261963 ATP13A5Q4VNC0 1218 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 METTL2BQ6P1Q9 378 aaKnown RBP21.98■■□□□ 1.11
MCF2L-201ENST00000261963 TPRG1Q6ZUI0 275 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 ZNF555Q8NEP9 628 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 LILRB4Q8NHJ6 448 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 GLMNQ92990 594 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 USP7Q93009 1102 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 ECHDC3Q96DC8 303 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 SCRN2Q96FV2 425 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 NODALQ96S42 347 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 TP63Q9H3D4 680 aaPredicted RBP21.98■■□□□ 1.11
MCF2L-201ENST00000261963 CARS2Q9HA77 564 aaKnown RBP21.98■■□□□ 1.11
MCF2L-201ENST00000261963 NECTIN3Q9NQS3 549 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 FAM118AQ9NWS6 357 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 KCTD5Q9NXV2 234 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 ZDHHC3Q9NYG2 299 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 KIAA1671Q9BY89 1806 aa21.98■■□□□ 1.11
MCF2L-201ENST00000261963 STK16O75716 305 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 ANXA6P08133 673 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 TCF3P15923 654 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 GJA1P17302 382 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 ARHGEF7Q14155 803 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 LRIT3Q3SXY7 679 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 TTLL9Q3SXZ7 439 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 SPANXN4Q5MJ08 99 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 CLIP4Q8N3C7 705 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 CCDC115Q96NT0 180 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 ZBTB18Q99592 522 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 LRTM1Q9HBL6 345 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 MBD1Q9UIS9 605 aaPredicted RBP21.97■■□□□ 1.11
MCF2L-201ENST00000261963 SNPHO15079 494 aa21.97■■□□□ 1.11
MCF2L-201ENST00000261963 AXIN1O15169 862 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms