RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 BORCS6Q96GS4 357 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 FRMD6Q96NE9 622 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 CDADC1Q9BWV3 514 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 CMTM6Q9NX76 183 aa4.22□□□□□ -1.73
VPS13C-202ENST00000261517 ARL6IP5O75915 188 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 C9P02748 559 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 KLK3P07288 261 aaPredicted RBP4.21□□□□□ -1.73
VPS13C-202ENST00000261517 UQCRC2P22695 453 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 ACTR1AP61163 376 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 REP15Q6BDI9 236 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 GLYATQ6IB77 296 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 DOK6Q6PKX4 331 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 SYVN1Q86TM6 617 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 SLC45A3Q96JT2 553 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 TM9SF3Q9HD45 589 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 ANKMY1Q9P2S6 941 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 GON4LQ3T8J9 2241 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 ISPDA4D126 451 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 CHP2O43745 196 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 CCR4P51679 360 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 GBX2P52951 348 aaPredicted RBP4.21□□□□□ -1.73
VPS13C-202ENST00000261517 SERTAD2Q14140 314 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 SNAP47Q5SQN1 464 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 PM20D1Q6GTS8 502 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 NPNTQ6UXI9 565 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 LRRN1Q6UXK5 716 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 OR14C36Q8NHC7 312 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 LPPQ93052 612 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 IGSF21Q96ID5 467 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 POLR3BQ9NW08 1133 aaPredicted RBP4.21□□□□□ -1.73
VPS13C-202ENST00000261517 DHRS7Q9Y394 339 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 AP4B1Q9Y6B7 739 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 LY75O60449 1722 aa4.21□□□□□ -1.73
VPS13C-202ENST00000261517 DNAJC25-GNG10A0A024R161 153 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ATP6AP2A0A1C7CYW4 349 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 C2orf74A8MZ97 194 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 PCDH17O14917 1159 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 LATO43561 262 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 SYPP08247 313 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ACPPP15309 386 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 UGT1A4P22310 534 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 GNALP38405 381 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 RABIFP47224 123 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 DHCR24Q15392 516 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ARL13AQ5H913 290 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 MORN1Q5T089 497 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 NCBP2-AS2Q69YL0 99 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 KRT77Q7Z794 578 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 TCEAL8Q8IYN2 117 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 OR52K2Q8NGK3 314 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 JOSD2Q8TAC2 188 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 KAT2AQ92830 837 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CNDP2Q96KP4 475 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 LGR4Q9BXB1 951 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 TM6SF2Q9BZW4 377 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 C6orf62Q9GZU0 229 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 BTBD1Q9H0C5 482 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ADAMTS10Q9H324 1103 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 DGKBQ9Y6T7 804 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 TAF1LQ8IZX4 1826 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 A0A096LPI6 279 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CAPN5O15484 640 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 VNN2O95498 520 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 HOXA9P31269 272 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CCR10P46092 362 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 KCNC1P48547 511 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 IDH3AP50213 366 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CLCN7P51798 805 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 C1QTNF8P60827 252 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 FOLH1Q04609 750 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ST3GAL3Q11203 375 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 FAM26DQ5JW98 314 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 BORAQ6PGQ7 559 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 THOC6Q86W42 341 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 OR5L2Q8NGL0 311 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CRYGNQ8WXF5 182 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CREB3L1Q96BA8 519 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 RCN3Q96D15 328 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 KCNC2Q96PR1 638 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ARHGEF3Q9NR81 526 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 MIA3Q5JRA6 1907 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 RNGTTO60942 597 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 TSPAN9O75954 239 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CD9P21926 228 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 MNDAP41218 407 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 TM4SF4P48230 202 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CDKL1Q00532 357 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 NFKB2Q00653 900 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 GBE1Q04446 702 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 DLG2Q15700 870 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 DENND5AQ6IQ26 1287 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 VITQ6UXI7 678 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ASB18Q6ZVZ8 466 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ARNTL2Q8WYA1 636 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 IMP4Q96G21 291 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CDKN2AIPNLQ96HQ2 116 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 MND1Q9BWT6 205 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 PTGES2Q9H7Z7 377 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ANKRA2Q9H9E1 313 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 RDH14Q9HBH5 336 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms