RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 DNM1LO00429 736 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 TBCAO75347 108 aaKnown RBP4.04□□□□□ -1.76
CCDC54-201ENST00000261058 IGHV4-59P01825 116 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 IGHV4-31P0DP07 118 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 NEFHP12036 1026 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 P4HA1P13674 534 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 ADRA2CP18825 462 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 CASQ1P31415 396 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 ATP6V1E1P36543 226 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 MNDAP41218 407 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 CDH11P55287 796 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 UBASH3AP57075 661 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 DLK1P80370 383 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 P2RY6Q15077 328 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 ODF4Q2M2E3 257 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 MCMDC2Q4G0Z9 681 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 PARP10Q53GL7 1025 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 SFMBT2Q5VUG0 894 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 KLHL10Q6JEL2 608 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 MFSD6Q6ZSS7 791 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 SLC26A9Q7LBE3 791 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 GALNTL5Q7Z4T8 443 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 ADCK2Q7Z695 626 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 ISCA2Q86U28 154 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 METTL23Q86XA0 190 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 IQCA1Q86XH1 822 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 CARNMT1Q8N4J0 409 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 STPG4Q8N801 248 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 OR52N5Q8NH56 324 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 C9orf43Q8TAL5 461 aaPredicted RBP4.04□□□□□ -1.76
CCDC54-201ENST00000261058 N4BP2L2Q92802 583 aaPredicted RBP4.04□□□□□ -1.76
CCDC54-201ENST00000261058 SNX21Q969T3 373 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 SIPA1Q96FS4 1042 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 SPATA33Q96N06 139 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 MGME1Q9BQP7 344 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 PI4K2AQ9BTU6 479 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 C2orf40Q9H1Z8 148 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 SUDS3Q9H7L9 328 aaPredicted RBP4.04□□□□□ -1.76
CCDC54-201ENST00000261058 PFDN4Q9NQP4 134 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 FGF21Q9NSA1 209 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 TBC1D7Q9P0N9 293 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 WDR83OSQ9Y284 106 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 ATP6V0A2Q9Y487 856 aa4.04□□□□□ -1.76
CCDC54-201ENST00000261058 A0A087WYN8 130 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 SMIM1B2RUZ4 78 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 ERVV-2B6SEH9 535 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 PRR23D1E9PI22 279 aaPredicted RBP4.03□□□□□ -1.76
CCDC54-201ENST00000261058 O00370 1275 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 ATP6AP2O75787 350 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 PRR23D2P0DMB1 279 aaPredicted RBP4.03□□□□□ -1.76
CCDC54-201ENST00000261058 GP1BBP13224 206 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 TCF4P15884 667 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 DESP17661 470 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 CA6P23280 308 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 ITGA3P26006 1051 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 ATP5DP30049 168 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 CD151P48509 253 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 MAZP56270 477 aaKnown RBP4.03□□□□□ -1.76
CCDC54-201ENST00000261058 HMGN5P82970 282 aaKnown RBP4.03□□□□□ -1.76
CCDC54-201ENST00000261058 RBP5P82980 135 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 MZT1Q08AG7 82 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 FAM174BQ3ZCQ3 159 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 ODF2Q5BJF6 829 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 C11orf88Q6PI97 169 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 TRMT1LQ7Z2T5 733 aaKnown RBP4.03□□□□□ -1.76
CCDC54-201ENST00000261058 NR2C2APQ86WQ0 139 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 MMD2Q8IY49 270 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 ZNF383Q8NA42 475 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 VANGL1Q8TAA9 524 aaPredicted RBP4.03□□□□□ -1.76
CCDC54-201ENST00000261058 FAM162AQ96A26 154 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 ERO1AQ96HE7 468 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 BICC1Q9H694 974 aaKnown RBP4.03□□□□□ -1.76
CCDC54-201ENST00000261058 SIX2Q9NPC8 291 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 ECHDC1Q9NTX5 307 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 C2orf42Q9NWW7 574 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 POLLQ9UGP5 575 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 IKBKGQ9Y6K9 419 aa4.03□□□□□ -1.76
CCDC54-201ENST00000261058 DUXAA6NLW8 204 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 FAM72CH0Y354 149 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 ZFYP08048 801 aaPredicted RBP4.02□□□□□ -1.77
CCDC54-201ENST00000261058 PLA2G4BP0C869 781 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 IRF2P14316 349 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 TCEA1P23193 301 aaKnown RBP4.02□□□□□ -1.77
CCDC54-201ENST00000261058 JAK1P23458 1154 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 AZGP1P25311 298 aaKnown RBP4.02□□□□□ -1.77
CCDC54-201ENST00000261058 TNNT3P45378 269 aaPredicted RBP4.02□□□□□ -1.77
CCDC54-201ENST00000261058 RPL21P46778 160 aaKnown RBP4.02□□□□□ -1.77
CCDC54-201ENST00000261058 GMPSP49915 693 aaPredicted RBP4.02□□□□□ -1.77
CCDC54-201ENST00000261058 TAF10Q12962 218 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 GPR17Q13304 367 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 VEZF1Q14119 521 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 TAF7Q15545 349 aaPredicted RBP4.02□□□□□ -1.77
CCDC54-201ENST00000261058 KIAA1644Q3SXP7 199 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 PDLIM3Q53GG5 364 aaPredicted RBP4.02□□□□□ -1.77
CCDC54-201ENST00000261058 TCTE1Q5JU00 501 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 C9orf50Q5SZB4 431 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 FAM72AQ5TYM5 149 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 FAM72DQ6L9T8 149 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 FAM72BQ86X60 149 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 APLFQ8IW19 511 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms