RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TIMM29Q9BSF4 260 aa21.66■■□□□ 1.06
SIX3-201ENST00000260653 RMI1Q9H9A7 625 aa21.66■■□□□ 1.06
SIX3-201ENST00000260653 C1orf109Q9NX04 203 aa21.66■■□□□ 1.06
SIX3-201ENST00000260653 DUSP12Q9UNI6 340 aa21.66■■□□□ 1.06
SIX3-201ENST00000260653 POMPQ9Y244 141 aa21.66■■□□□ 1.06
SIX3-201ENST00000260653 L3MBTL1Q9Y468 752 aa21.66■■□□□ 1.06
SIX3-201ENST00000260653 GPSM3Q9Y4H4 160 aa21.66■■□□□ 1.06
SIX3-201ENST00000260653 LRRC72A6NJI9 287 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 ANGPT2O15123 496 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 NPPBP16860 134 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 PIGGQ5H8A4 983 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 TMPRSS11BQ86T26 416 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 NUDT8Q8WV74 236 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 SLC39A3Q9BRY0 314 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 USP36Q9P275 1121 aaKnown RBP21.65■■□□□ 1.06
SIX3-201ENST00000260653 MAP10Q9P2G4 905 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 ACSL5Q9ULC5 683 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 NDUFAF1Q9Y375 327 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 KLHL33A6NCF5 533 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 ANKRD28O15084 1053 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 KRT36O76013 467 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 CCND1P24385 295 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 POLR2JP52435 117 aaKnown RBP21.65■■□□□ 1.06
SIX3-201ENST00000260653 KCNK10P57789 538 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 CEACAM7Q14002 265 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 PTGR1Q14914 329 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 GRHL2Q6ISB3 625 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 ZFAND4Q86XD8 727 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 ZNF687Q8N1G0 1237 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 C2orf73Q8N5S3 287 aaPredicted RBP21.65■■□□□ 1.06
SIX3-201ENST00000260653 DENND6BQ8NEG7 585 aa21.65■■□□□ 1.06
SIX3-201ENST00000260653 POLMQ9NP87 494 aaPredicted RBP21.65■■□□□ 1.06
SIX3-201ENST00000260653 ASPDHA6ND91 283 aa21.64■■□□□ 1.06
SIX3-201ENST00000260653 RSL1D1O76021 490 aaKnown RBP21.64■■□□□ 1.06
SIX3-201ENST00000260653 KELP23276 732 aa21.64■■□□□ 1.06
SIX3-201ENST00000260653 PCDH1Q08174 1060 aa21.64■■□□□ 1.06
SIX3-201ENST00000260653 TPRG1LQ5T0D9 272 aa21.64■■□□□ 1.06
SIX3-201ENST00000260653 ANO7Q6IWH7 933 aa21.64■■□□□ 1.06
SIX3-201ENST00000260653 SLCO4C1Q6ZQN7 724 aa21.64■■□□□ 1.06
SIX3-201ENST00000260653 WDR20Q8TBZ3 569 aa21.64■■□□□ 1.06
SIX3-201ENST00000260653 GUCD1Q96NT3 240 aa21.64■■□□□ 1.06
SIX3-201ENST00000260653 CCDC177Q9NQR7 707 aaPredicted RBP21.64■■□□□ 1.06
SIX3-201ENST00000260653 EIF3LQ9Y262 564 aaKnown RBP21.64■■□□□ 1.06
SIX3-201ENST00000260653 FPGTO14772 594 aa21.64■■□□□ 1.05
SIX3-201ENST00000260653 SEMA4FO95754 770 aa21.64■■□□□ 1.05
SIX3-201ENST00000260653 HNRNPA2B1P22626 353 aaKnown RBP21.64■■□□□ 1.05
SIX3-201ENST00000260653 KIAA0040Q15053 153 aa21.64■■□□□ 1.05
SIX3-201ENST00000260653 SMU1Q2TAY7 513 aa21.64■■□□□ 1.05
SIX3-201ENST00000260653 CATSPEREQ5SY80 951 aa21.64■■□□□ 1.05
SIX3-201ENST00000260653 CAPRIN2Q6IMN6 1127 aaKnown RBP21.64■■□□□ 1.05
SIX3-201ENST00000260653 ADNP2Q6IQ32 1131 aa21.64■■□□□ 1.05
SIX3-201ENST00000260653 PCYOX1LQ8NBM8 494 aa21.64■■□□□ 1.05
SIX3-201ENST00000260653 PDXPQ96GD0 296 aa21.64■■□□□ 1.05
SIX3-201ENST00000260653 BMFQ96LC9 184 aa21.64■■□□□ 1.05
SIX3-201ENST00000260653 MTERF1Q99551 399 aaKnown RBP21.64■■□□□ 1.05
SIX3-201ENST00000260653 SERPINI1Q99574 410 aa21.64■■□□□ 1.05
SIX3-201ENST00000260653 CARS2Q9HA77 564 aaKnown RBP21.64■■□□□ 1.05
SIX3-201ENST00000260653 IL1RL2Q9HB29 575 aa21.64■■□□□ 1.05
SIX3-201ENST00000260653 GPRC5BQ9NZH0 403 aa21.64■■□□□ 1.05
SIX3-201ENST00000260653 PRSS38A1L453 326 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 HNF4AP41235 474 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 DGKEP52429 567 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 DNAH14Q0VDD8 3507 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 MAD2L1Q13257 205 aaPredicted RBP21.63■■□□□ 1.05
SIX3-201ENST00000260653 DDX39BQ13838 428 aaKnown RBP21.63■■□□□ 1.05
SIX3-201ENST00000260653 ZNF423Q2M1K9 1284 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 TIGD2Q4W5G0 525 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 LIX1Q8N485 282 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 STMN2Q93045 179 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 INSM2Q96T92 566 aaPredicted RBP21.63■■□□□ 1.05
SIX3-201ENST00000260653 EBF2Q9HAK2 575 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 SGK2Q9HBY8 427 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 ADA2Q9NZK5 511 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 A0A1W2PP18 115 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 FAM234BA2RU67 622 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 RPN2P04844 631 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 MSX2P35548 267 aaPredicted RBP21.63■■□□□ 1.05
SIX3-201ENST00000260653 KIAA1024LP59773 190 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 C8orf82Q6P1X6 216 aaPredicted RBP21.63■■□□□ 1.05
SIX3-201ENST00000260653 HACD2Q6Y1H2 254 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 TSPEARQ8WU66 669 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 SCARF2Q96GP6 870 aaPredicted RBP21.63■■□□□ 1.05
SIX3-201ENST00000260653 C12orf66Q96MD2 445 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 DCLRE1BQ9H816 532 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 LMAN1LQ9HAT1 526 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 CROTQ9UKG9 612 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 CYP8B1Q9UNU6 501 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 PCM1Q15154 2024 aa21.63■■□□□ 1.05
SIX3-201ENST00000260653 CCDC154A6NI56 674 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 PRR19A6NJB7 356 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 H0YIV9 168 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 GAS6Q14393 721 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 THEMIS2Q5TEJ8 643 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 ROPN1LQ96C74 230 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 APIPQ96GX9 242 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 TRIT1Q9H3H1 467 aaKnown RBP21.62■■□□□ 1.05
SIX3-201ENST00000260653 C6orf106Q9H6K1 298 aaPredicted RBP21.62■■□□□ 1.05
SIX3-201ENST00000260653 DLGAP4Q9Y2H0 992 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 DYRK1BQ9Y463 629 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 PSMG1O95456 288 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms