RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 PTPRBP23467 1997 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 OR6C74A6NCV1 312 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 NTN3O00634 580 aaPredicted RBP20.02■□□□□ 0.79
RTCA-201ENST00000260563 CASC3O15234 703 aaKnown RBP20.02■□□□□ 0.79
RTCA-201ENST00000260563 DKK1O94907 266 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 CPNE6O95741 557 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 SERPINE1P05121 402 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 GRK2P25098 689 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 CSF2RBP32927 897 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 NAGLUP54802 743 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 HERVK_113P63132 956 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 CBX1P83916 185 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 SETDB1Q15047 1291 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 CLPPQ16740 277 aaPredicted RBP20.02■□□□□ 0.79
RTCA-201ENST00000260563 ANKS6Q68DC2 871 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 SULT1C3Q6IMI6 304 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 DHRS13Q6UX07 377 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 NCSTNQ92542 709 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 RHBDF1Q96CC6 855 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 L3HYPDHQ96EM0 354 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 CCDC138Q96M89 665 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 ERVK-6Q9BXR3 956 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 HRASLS2Q9NWW9 162 aa20.02■□□□□ 0.79
RTCA-201ENST00000260563 ATXN7L1Q9ULK2 861 aaPredicted RBP20.02■□□□□ 0.79
RTCA-201ENST00000260563 ZNF839A8K0R7 811 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 TCP11X1B4DZS4 312 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 D6RAR5 112 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 MATN2O00339 956 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 SHOX2O60902 331 aaPredicted RBP20.01■□□□□ 0.79
RTCA-201ENST00000260563 SLC16A8O95907 504 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 ERGP11308 486 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 HSD17B2P37059 387 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 BST1Q10588 318 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 STX3Q13277 289 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 ARHGAP19Q14CB8 494 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 ZNF678Q5SXM1 525 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 CES4AQ5XG92 561 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 ARMC6Q6NXE6 501 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 MBOAT1Q6ZNC8 495 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 TCAIMQ8N3R3 496 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 OR2L8Q8NGY9 312 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 DPYSL5Q9BPU6 564 aa20.01■□□□□ 0.79
RTCA-201ENST00000260563 PTBP2Q9UKA9 531 aaKnown RBP20.01■□□□□ 0.79
RTCA-201ENST00000260563 DCHS1Q96JQ0 3298 aa20■□□□□ 0.79
RTCA-201ENST00000260563 GSAPA4D1B5 854 aa20■□□□□ 0.79
RTCA-201ENST00000260563 BTN3A3O00478 584 aa20■□□□□ 0.79
RTCA-201ENST00000260563 SIX3O95343 332 aaPredicted RBP20■□□□□ 0.79
RTCA-201ENST00000260563 POLR2CP19387 275 aaPredicted RBP20■□□□□ 0.79
RTCA-201ENST00000260563 AGTR2P50052 363 aa20■□□□□ 0.79
RTCA-201ENST00000260563 HNMTP50135 292 aa20■□□□□ 0.79
RTCA-201ENST00000260563 PNLIPRP1P54315 467 aa20■□□□□ 0.79
RTCA-201ENST00000260563 INSM1Q01101 510 aaPredicted RBP20■□□□□ 0.79
RTCA-201ENST00000260563 SQSTM1Q13501 440 aa20■□□□□ 0.79
RTCA-201ENST00000260563 IRGCQ6NXR0 463 aa20■□□□□ 0.79
RTCA-201ENST00000260563 WDR74Q6RFH5 385 aaPredicted RBP20■□□□□ 0.79
RTCA-201ENST00000260563 USP53Q70EK8 1073 aa20■□□□□ 0.79
RTCA-201ENST00000260563 PLXDC1Q8IUK5 500 aa20■□□□□ 0.79
RTCA-201ENST00000260563 SYTL1Q8IYJ3 562 aa20■□□□□ 0.79
RTCA-201ENST00000260563 ADGRF3Q8IZF5 1079 aa20■□□□□ 0.79
RTCA-201ENST00000260563 CCNYL1Q8N7R7 359 aa20■□□□□ 0.79
RTCA-201ENST00000260563 LINC01555Q8NAE3 123 aa20■□□□□ 0.79
RTCA-201ENST00000260563 MOCOSQ96EN8 888 aa20■□□□□ 0.79
RTCA-201ENST00000260563 NUDT22Q9BRQ3 303 aa20■□□□□ 0.79
RTCA-201ENST00000260563 ACSS2Q9NR19 701 aa20■□□□□ 0.79
RTCA-201ENST00000260563 WWOXQ9NZC7 414 aa20■□□□□ 0.79
RTCA-201ENST00000260563 TNPO3Q9Y5L0 923 aaKnown RBP20■□□□□ 0.79
RTCA-201ENST00000260563 MN1Q10571 1320 aaPredicted RBP19.99■□□□□ 0.79
RTCA-201ENST00000260563 ADAMTS20P59510 1910 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 PIPSLA2A3N6 862 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 TMEM114B3SHH9 223 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 TAPBPO15533 448 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 CHRM5P08912 532 aaPredicted RBP19.99■□□□□ 0.79
RTCA-201ENST00000260563 IMPA1P29218 277 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 EEF1DP29692 281 aaKnown RBP19.99■□□□□ 0.79
RTCA-201ENST00000260563 CYP2A13Q16696 494 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 FBXO48Q5FWF7 155 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 CFAP157Q5JU67 520 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 RBM44Q6ZP01 1051 aaKnown RBP19.99■□□□□ 0.79
RTCA-201ENST00000260563 HMGCLL1Q8TB92 370 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 UBTD2Q8WUN7 234 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 ZNF480Q8WV37 535 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 FBXL8Q96CD0 374 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 TMEM79Q9BSE2 394 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 C1QTNF3Q9BXJ4 246 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 RAB33BQ9H082 229 aa19.99■□□□□ 0.79
RTCA-201ENST00000260563 STOX2Q9P2F5 926 aaPredicted RBP19.99■□□□□ 0.79
RTCA-201ENST00000260563 C2orf74A8MZ97 194 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 CAPN5O15484 640 aaPredicted RBP19.98■□□□□ 0.79
RTCA-201ENST00000260563 NPHS1O60500 1241 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 SNNO75324 88 aaPredicted RBP19.98■□□□□ 0.79
RTCA-201ENST00000260563 SUPT7LO94864 414 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 RPS17P08708 135 aaKnown RBP19.98■□□□□ 0.79
RTCA-201ENST00000260563 ID4P47928 161 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 SLC1A6P48664 564 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 GFERP55789 205 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 ABCE1P61221 599 aaKnown RBP19.98■□□□□ 0.79
RTCA-201ENST00000260563 CFHR1Q03591 330 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 PCBP2Q15366 365 aaKnown RBP eCLIP19.98■□□□□ 0.79
RTCA-201ENST00000260563 C18orf21Q32NC0 220 aaPredicted RBP19.98■□□□□ 0.79
RTCA-201ENST00000260563 UNC50Q53HI1 259 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms