RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 BNC2Q6ZN30 1099 aaPredicted RBP18.32■□□□□ 0.52
TRIM47-201ENST00000254816 TRIM69Q86WT6 500 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 RGL4Q8IZJ4 473 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 L3MBTL4Q8NA19 623 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 SELENOMQ8WWX9 145 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 BMFQ96LC9 184 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 SDR39U1Q9NRG7 319 aaPredicted RBP18.32■□□□□ 0.52
TRIM47-201ENST00000254816 DLGAP2Q9P1A6 1054 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 SH2B3Q9UQQ2 575 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 SEMA4FO95754 770 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 LINGO3P0C6S8 592 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 PEX2P28328 305 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 ATXN3P54252 364 aaPredicted RBP18.31■□□□□ 0.52
TRIM47-201ENST00000254816 UFM1P61960 85 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 UBXN2BQ14CS0 331 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 MAPRE2Q15555 327 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 IMPG1Q17R60 797 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 MMEL1Q495T6 779 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 GGTA1PQ4G0N0 100 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 PYCR3Q53H96 274 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 REP15Q6BDI9 236 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 GALNT13Q8IUC8 556 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 FRMD1Q8N878 549 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 HHIPQ96QV1 700 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 FOXQ1Q9C009 403 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 ELOVL6Q9H5J4 265 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 C6orf106Q9H6K1 298 aaPredicted RBP18.31■□□□□ 0.52
TRIM47-201ENST00000254816 EFCAB1Q9HAE3 211 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 MRGBPQ9NV56 204 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 USP36Q9P275 1121 aaKnown RBP18.31■□□□□ 0.52
TRIM47-201ENST00000254816 POLR3HQ9Y535 204 aaPredicted RBP18.31■□□□□ 0.52
TRIM47-201ENST00000254816 COL6A3P12111 3177 aa18.31■□□□□ 0.52
TRIM47-201ENST00000254816 H3BNX3 289 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 FPGTO14772 594 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 RGS14O43566 566 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 KRT6AP02538 564 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 KRT6BP04259 564 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 UBTFL6P0CB48 400 aaPredicted RBP18.3■□□□□ 0.52
TRIM47-201ENST00000254816 SLC2A4P14672 509 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 XRCC1P18887 633 aaPredicted RBP18.3■□□□□ 0.52
TRIM47-201ENST00000254816 KRT6CP48668 564 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 RPL38P63173 70 aaKnown RBP18.3■□□□□ 0.52
TRIM47-201ENST00000254816 ART3Q13508 389 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 DOC2AQ14183 400 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 ENPP7Q6UWV6 458 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 ASB12Q8WXK4 309 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 ACPTQ9BZG2 426 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 WDR41Q9HAD4 459 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 KANSL1LA0AUZ9 987 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 SLC28A1O00337 649 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 IFRD1O00458 451 aaPredicted RBP18.3■□□□□ 0.52
TRIM47-201ENST00000254816 SLC35G4P0C7Q5 338 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 JUPP14923 745 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 HNRNPA2B1P22626 353 aaKnown RBP18.3■□□□□ 0.52
TRIM47-201ENST00000254816 VARSP26640 1264 aaKnown RBP18.3■□□□□ 0.52
TRIM47-201ENST00000254816 ACADVLP49748 655 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 DGKEP52429 567 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 IL23RQ5VWK5 629 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 SYT13Q7L8C5 426 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 TRIM46Q7Z4K8 759 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 KLHDC8AQ8IYD2 350 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 CHCHD4Q8N4Q1 142 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 NUDT8Q8WV74 236 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 NEIL2Q969S2 332 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 CAAP1Q9H8G2 361 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 SGK2Q9HBY8 427 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 PRPF19Q9UMS4 504 aaKnown RBP18.3■□□□□ 0.52
TRIM47-201ENST00000254816 SNX6Q9UNH7 406 aa18.3■□□□□ 0.52
TRIM47-201ENST00000254816 E7ENX8 843 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 G6PDP11413 515 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 PNLIPRP1P54315 467 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 TAP2Q03519 686 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 EMX2Q04743 252 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 STX5Q13190 355 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 CEACAM7Q14002 265 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 VPS26BQ4G0F5 336 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 SFT2D3Q587I9 215 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 CAPN13Q6MZZ7 669 aaPredicted RBP18.29■□□□□ 0.52
TRIM47-201ENST00000254816 LAYNQ6UX15 382 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 RD3Q7Z3Z2 195 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 LRRC56Q8IYG6 542 aaPredicted RBP18.29■□□□□ 0.52
TRIM47-201ENST00000254816 PDXPQ96GD0 296 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 INSM2Q96T92 566 aaPredicted RBP18.29■□□□□ 0.52
TRIM47-201ENST00000254816 MRPL1Q9BYD6 325 aaKnown RBP18.29■□□□□ 0.52
TRIM47-201ENST00000254816 CARS2Q9HA77 564 aaKnown RBP18.29■□□□□ 0.52
TRIM47-201ENST00000254816 FANCMQ8IYD8 2048 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 PRSS38A1L453 326 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 CAPN3P20807 821 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 FZD5Q13467 585 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 TRIP10Q15642 601 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 ZNF423Q2M1K9 1284 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 PIGGQ5H8A4 983 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 LIPJQ5W064 366 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 DCUN1D3Q8IWE4 304 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 OR5K2Q8NHB8 316 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 RLN3Q8WXF3 142 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 RAD51AP1Q96B01 352 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 TOE1Q96GM8 510 aaKnown RBP18.29■□□□□ 0.52
TRIM47-201ENST00000254816 PPP3R2Q96LZ3 170 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 C12orf66Q96MD2 445 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms