RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 SLC35B2Q8TB61 432 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 C12orf42Q96LP6 360 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 CXorf21Q9HAI6 301 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 GIN1Q9NXP7 522 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 DNAJB4Q9UDY4 337 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 GABRQQ9UN88 632 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 TPD52L2O43399 206 aaKnown RBP18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 GDI2P50395 445 aaKnown RBP18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 LAPTM4AQ15012 233 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 ZNF311Q5JNZ3 666 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 STX12Q86Y82 276 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 OR2L3Q8NG85 312 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 BORCS5Q969J3 196 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 POLR2J3Q9H1A7 115 aaKnown RBP18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 OR51B5Q9H339 312 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 MCCC2Q9HCC0 563 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 TAS2R1Q9NYW7 299 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 STOML2Q9UJZ1 356 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 PLIN4Q96Q06 1357 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 FAM234BA2RU67 622 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 SMAD9O15198 467 aaKnown RBP18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 TULP3O75386 442 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 VARSP26640 1264 aaKnown RBP18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 CRISP3P54108 245 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 ERVK-8P63133 956 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 PRKD1Q15139 912 aaPredicted RBP18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 CRB2Q5IJ48 1285 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 ACDQ96AP0 544 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 CCM2Q9BSQ5 444 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 DAPL1A0PJW8 107 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 PLK4O00444 970 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 INPPL1O15357 1258 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 PGRP06401 933 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 UFM1P61960 85 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 MYLK3Q32MK0 819 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 MS4A13Q5J8X5 152 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 ANO7Q6IWH7 933 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 TNFAIP8L1Q8WVP5 186 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 C8orf48Q96LL4 319 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 TBL1XR1Q9BZK7 514 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 TDP1Q9NUW8 608 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 SNX7Q9UNH6 387 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 HEBP2Q9Y5Z4 205 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 SLIT3O75094 1523 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 SLC7A1P30825 629 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 NIPA2Q8N8Q9 360 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 ZDHHC18Q9NUE0 388 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 SRRDQ9UH36 339 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 ROBO1Q9Y6N7 1651 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 CLIC1O00299 241 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 BLKP51451 505 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 HSF2Q03933 536 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 RFTN1Q14699 578 aaPredicted RBP18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 SLC35G1Q2M3R5 365 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 OLFML1Q6UWY5 402 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 TMEM110Q86TL2 294 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 THOC6Q86W42 341 aaKnown RBP18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 OR4F6Q8NGB9 312 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 OR2AJ1Q8NGZ0 328 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 SLC22A17Q8WUG5 538 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 TTTY10Q9BZA0 68 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 COMMD4Q9H0A8 199 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 CALML5Q9NZT1 146 aa18.25■□□□□ 0.51
SMARCC1-201ENST00000254480 GNSP15586 552 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 DRICH1Q6PGQ1 229 aaPredicted RBP18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 TMEM130Q8N3G9 435 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 LMX1AQ8TE12 382 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 C10orf82Q8WW14 230 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 RFKQ969G6 155 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 DMRTB1Q96MA1 342 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 TMEM74Q96NL1 305 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 SGIP1Q9BQI5 828 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 MBD2Q9UBB5 411 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 UTS2RQ9UKP6 389 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 RPL26L1Q9UNX3 145 aaKnown RBP18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 A0A1W2PQ45 241 aaPredicted RBP18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 A0A1W2PQY0 241 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 TRMUO75648 421 aaKnown RBP18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 SLC6A9P48067 706 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 NUDT6P53370 316 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 PGGT1BP53609 377 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 LACTB2Q53H82 288 aaPredicted RBP18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 PLEKHO2Q8TD55 490 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 IFT46Q9NQC8 304 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 ILVBLA1L0T0 632 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 ANKRD66B4E2M5 251 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 WRBO00258 174 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 FGF18O76093 207 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 PLGP00747 810 aaPredicted RBP18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 CYP11A1P05108 521 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 ARHGDIBP52566 201 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 E2F2Q14209 437 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 ACSBG2Q5FVE4 666 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 NUDT13Q86X67 352 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 OR10G2Q8NGC3 310 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 SLC35F5Q8WV83 523 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 RASSF5Q8WWW0 418 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 NTAN1Q96AB6 310 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 DGAT2Q96PD7 388 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 SMIM30A4D0T7 59 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms