RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 GPR26Q8NDV2 337 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 MRPL17Q9NRX2 175 aaKnown RBP17.96■□□□□ 0.47
LRP3-201ENST00000253193 ABCB8Q9NUT2 735 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 NPIPB15A6NHN6 443 aaPredicted RBP17.96■□□□□ 0.47
LRP3-201ENST00000253193 F11P03951 625 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 CDH3P22223 829 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 ZXDBP98169 803 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 RUNDC3AQ59EK9 446 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 CMTM8Q8IZV2 173 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 BEND7Q8N7W2 519 aaPredicted RBP17.96■□□□□ 0.47
LRP3-201ENST00000253193 HMX1Q9NP08 348 aaPredicted RBP17.96■□□□□ 0.47
LRP3-201ENST00000253193 KDM1AO60341 852 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 BCAS1O75363 584 aaPredicted RBP17.96■□□□□ 0.47
LRP3-201ENST00000253193 CDKN2CP42773 168 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 CRATP43155 626 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 SPCS2Q15005 226 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 RFX4Q33E94 735 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 USP39Q53GS9 565 aaKnown RBP17.96■□□□□ 0.47
LRP3-201ENST00000253193 DCAF4L2Q8NA75 395 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 CD99L2Q8TCZ2 262 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 PPP1R14BQ96C90 147 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 DCAF13Q9NV06 445 aaKnown RBP17.96■□□□□ 0.47
LRP3-201ENST00000253193 DNAJC11Q9NVH1 559 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 GPR153Q6NV75 609 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 USE1Q9NZ43 259 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 AP3M1Q9Y2T2 418 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 FABP3P05413 133 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 ZNF12P17014 697 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 FSHRP23945 695 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 GSTM2P28161 218 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 CYP4F2P78329 520 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 NAE1Q13564 534 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 DMC1Q14565 340 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 CTU2Q2VPK5 515 aaKnown RBP17.95■□□□□ 0.46
LRP3-201ENST00000253193 OR2T5Q6IEZ7 315 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 TMEM179BQ7Z7N9 219 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 RBM23Q86U06 439 aaKnown RBP17.95■□□□□ 0.46
LRP3-201ENST00000253193 IGFN1Q86VF2 1251 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 DCP2Q8IU60 420 aaKnown RBP17.95■□□□□ 0.46
LRP3-201ENST00000253193 SLC44A2Q8IWA5 706 aaPredicted RBP17.95■□□□□ 0.46
LRP3-201ENST00000253193 OR2T29Q8NH02 315 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 SCAMP4Q969E2 229 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 PDLIM5Q96HC4 596 aaKnown RBP17.95■□□□□ 0.46
LRP3-201ENST00000253193 DOK1Q99704 481 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 KAT8Q9H7Z6 458 aaKnown RBP17.95■□□□□ 0.46
LRP3-201ENST00000253193 BRD9Q9H8M2 597 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 CLDN25C9JDP6 229 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 PRPS2P11908 318 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 PRIM2P49643 509 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 SYT16Q17RD7 645 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 GPR33Q49SQ1 333 aa17.95■□□□□ 0.46
LRP3-201ENST00000253193 MYO7AQ13402 2215 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 KPNA4O00629 521 aaPredicted RBP17.94■□□□□ 0.46
LRP3-201ENST00000253193 EIF2B2P49770 351 aaKnown RBP17.94■□□□□ 0.46
LRP3-201ENST00000253193 DGUOKQ16854 277 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 ZNF648Q5T619 568 aaPredicted RBP17.94■□□□□ 0.46
LRP3-201ENST00000253193 FRG2Q64ET8 278 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 PAGE2Q7Z2X7 111 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 FRG2BQ96QU4 278 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 TTLL2Q9BWV7 592 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 KLF16Q9BXK1 252 aaPredicted RBP17.94■□□□□ 0.46
LRP3-201ENST00000253193 C6orf62Q9GZU0 229 aaPredicted RBP17.94■□□□□ 0.46
LRP3-201ENST00000253193 KCNH6Q9H252 994 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 SACM1LQ9NTJ5 587 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 ZDHHC3Q9NYG2 299 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 TRPS1Q9UHF7 1281 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 RAPGEFL1Q9UHV5 662 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 TRIM64A6NGJ6 449 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 MAGEB17A8MXT2 336 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 H7C0S8 307 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 CD160O95971 181 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 SLC10A3P09131 477 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 HMGA1P17096 107 aaKnown RBP17.94■□□□□ 0.46
LRP3-201ENST00000253193 MAPK8P45983 427 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 LRRC74AQ0VAA2 488 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 USP51Q70EK9 711 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 BBS7Q8IWZ6 715 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 OR2AP1Q8NGE2 309 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 CLSTN3Q9BQT9 956 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 CLMPQ9H6B4 373 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 KIAA1522Q9P206 1035 aaPredicted RBP17.94■□□□□ 0.46
LRP3-201ENST00000253193 RPS6KA6Q9UK32 745 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 ZNF451Q9Y4E5 1061 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 LOC100506127A0A0U1RQW1 187 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 UPK1AO00322 258 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 UGT2B11O75310 529 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 MAGP20916 626 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 POU1F1P28069 291 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 SOAT1P35610 550 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 OPRL1P41146 370 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 ABHD18Q0P651 414 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 TUBA3CQ13748 450 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 SMN1Q16637 294 aaKnown RBP17.94■□□□□ 0.46
LRP3-201ENST00000253193 ATG9BQ674R7 924 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 P2RY8Q86VZ1 359 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 PIK3C3Q8NEB9 887 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 ABHD11Q8NFV4 315 aa17.94■□□□□ 0.46
LRP3-201ENST00000253193 RBMX2Q9Y388 322 aaKnown RBP17.94■□□□□ 0.46
LRP3-201ENST00000253193 TDRD15B5MCY1 1934 aaKnown RBP17.93■□□□□ 0.46
LRP3-201ENST00000253193 ANKRD28O15084 1053 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms