RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 RPS15P62841 145 aaKnown RBP22.05■■□□□ 1.12
LSM4-201ENST00000252816 DUPD1Q68J44 220 aa22.05■■□□□ 1.12
LSM4-201ENST00000252816 PAQR3Q6TCH7 311 aa22.05■■□□□ 1.12
LSM4-201ENST00000252816 SUSD1Q6UWL2 747 aa22.05■■□□□ 1.12
LSM4-201ENST00000252816 BBOF1Q8ND07 529 aa22.05■■□□□ 1.12
LSM4-201ENST00000252816 ACAT2Q9BWD1 397 aa22.05■■□□□ 1.12
LSM4-201ENST00000252816 TAS2R13Q9NYV9 303 aa22.05■■□□□ 1.12
LSM4-201ENST00000252816 GRHL1Q9NZI5 618 aa22.05■■□□□ 1.12
LSM4-201ENST00000252816 WHRNQ9P202 907 aa22.05■■□□□ 1.12
LSM4-201ENST00000252816 KLK4Q9Y5K2 254 aa22.05■■□□□ 1.12
LSM4-201ENST00000252816 AP1M2Q9Y6Q5 423 aa22.05■■□□□ 1.12
LSM4-201ENST00000252816 CDC14CA4D256 554 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 EIF3FO00303 357 aaPredicted RBP22.04■■□□□ 1.12
LSM4-201ENST00000252816 CTSVO60911 334 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 RECKO95980 971 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 HBQ1P09105 142 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 PGGT1BP53609 377 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 PNLIPRP1P54315 467 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 POLE2P56282 527 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 NFKB2Q00653 900 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 ARHGAP19Q14CB8 494 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 C1orf189Q5VU69 101 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 FAM69BQ5VUD6 431 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 RHBDD2Q6NTF9 364 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 UGT3A1Q6NUS8 523 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 TLDC1Q6P9B6 456 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 ZNF572Q7Z3I7 529 aaPredicted RBP22.04■■□□□ 1.12
LSM4-201ENST00000252816 ENDOVQ8N8Q3 282 aaKnown RBP22.04■■□□□ 1.12
LSM4-201ENST00000252816 ZNF480Q8WV37 535 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 EEF1AKMT1Q8WVE0 214 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 SMPDL3AQ92484 453 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 DLG3Q92796 817 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 ZUFSPQ96AP4 578 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 C16orf45Q96MC5 204 aaPredicted RBP22.04■■□□□ 1.12
LSM4-201ENST00000252816 IRAK4Q9NWZ3 460 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 GEMIN8Q9NWZ8 242 aaKnown RBP22.04■■□□□ 1.12
LSM4-201ENST00000252816 MOCS1Q9NZB8 636 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 DHCR7Q9UBM7 475 aaKnown RBP22.04■■□□□ 1.12
LSM4-201ENST00000252816 ZNF462Q96JM2 2506 aa22.04■■□□□ 1.12
LSM4-201ENST00000252816 TARM1B6A8C7 271 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 NDC80O14777 642 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 RAB40ALP0C0E4 278 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 SKIV2L2P42285 1042 aaKnown RBP22.03■■□□□ 1.12
LSM4-201ENST00000252816 IL10RAQ13651 578 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 UBE2R2Q712K3 238 aaPredicted RBP22.03■■□□□ 1.12
LSM4-201ENST00000252816 SYVN1Q86TM6 617 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 ZBED8Q8IZ13 594 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 PPFIBP2Q8ND30 876 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 GBP5Q96PP8 586 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 NLNQ9BYT8 704 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 SLC6A20Q9NP91 592 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 ADAMTS6Q9UKP5 1117 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 PSAT1Q9Y617 370 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 FER1L5A0AVI2 2057 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 BSNQ9UPA5 3926 aa22.03■■□□□ 1.12
LSM4-201ENST00000252816 E7ENX8 843 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 ZBTB14O43829 449 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 SYF2O95926 243 aaKnown RBP22.02■■□□□ 1.12
LSM4-201ENST00000252816 GCGRP47871 477 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 TAP2Q03519 686 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 MGAT5Q09328 741 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 CALCOCO2Q13137 446 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 HECTD2Q5U5R9 776 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 GPATCH11Q8N954 259 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 APOBEC4Q8WW27 367 aaKnown RBP22.02■■□□□ 1.12
LSM4-201ENST00000252816 ZNF285Q96NJ3 590 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 OLFM1Q99784 485 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 DPH2Q9BQC3 489 aaPredicted RBP22.02■■□□□ 1.12
LSM4-201ENST00000252816 ADNPQ9H2P0 1102 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 POLHQ9Y253 713 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 KCNMB2Q9Y691 235 aa22.02■■□□□ 1.12
LSM4-201ENST00000252816 SPTA1P02549 2419 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 IGKV1-8A0A0C4DH67 115 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 FDXRP22570 491 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 RPA3P35244 121 aaPredicted RBP22.01■■□□□ 1.11
LSM4-201ENST00000252816 HSD17B2P37059 387 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 RGS4P49798 205 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 KCNAB2Q13303 367 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 TSTA3Q13630 321 aaPredicted RBP22.01■■□□□ 1.11
LSM4-201ENST00000252816 NCF4Q15080 339 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 TRADDQ15628 312 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 UGT8Q16880 541 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 ZC3H12BQ5HYM0 836 aaKnown RBP22.01■■□□□ 1.11
LSM4-201ENST00000252816 LRRC56Q8IYG6 542 aaPredicted RBP22.01■■□□□ 1.11
LSM4-201ENST00000252816 LINGO1Q96FE5 620 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 SELENOSQ9BQE4 189 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 DPH7Q9BTV6 452 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 FAM117AQ9C073 453 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 STARD5Q9NSY2 213 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 ZFATQ9P243 1243 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 TAC3Q9UHF0 121 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 TCFL5Q9UL49 500 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 CORO1CQ9ULV4 474 aaPredicted RBP22.01■■□□□ 1.11
LSM4-201ENST00000252816 SRPK3Q9UPE1 567 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 VWA7Q9Y334 891 aa22.01■■□□□ 1.11
LSM4-201ENST00000252816 OR2A25A4D2G3 310 aa22■■□□□ 1.11
LSM4-201ENST00000252816 TSPAN12O95859 305 aa22■■□□□ 1.11
LSM4-201ENST00000252816 ATXN8OSP0DMR3 200 aa22■■□□□ 1.11
LSM4-201ENST00000252816 SFTPCP11686 197 aa22■■□□□ 1.11
LSM4-201ENST00000252816 AGXTP21549 392 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms