RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 RPIAP49247 311 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 TOP3AQ13472 1001 aaPredicted RBP16.43■□□□□ 0.22
SGPP1-201ENST00000247225 HIST2H2ACQ16777 129 aaPredicted RBP16.43■□□□□ 0.22
SGPP1-201ENST00000247225 ARTNQ5T4W7 220 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 ATAD3BQ5T9A4 648 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 TPGS1Q6ZTW0 290 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 NEK10Q6ZWH5 1172 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 ZNF467Q7Z7K2 595 aaPredicted RBP16.43■□□□□ 0.22
SGPP1-201ENST00000247225 ZNF683Q8IZ20 524 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 OR6Q1Q8NGQ2 317 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 FOXJ1Q92949 421 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 MED8Q96G25 268 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 HSH2DQ96JZ2 352 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 PSKH2Q96QS6 385 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 PRRG3Q9BZD7 231 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 HEBP1Q9NRV9 189 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 NUDT4Q9NZJ9 180 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 PCMT1P22061 227 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 MXD1Q05195 221 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 FAM110CQ1W6H9 321 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 RUNDC3AQ59EK9 446 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 CPZQ66K79 652 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 RSPO2Q6UXX9 243 aaPredicted RBP16.42■□□□□ 0.22
SGPP1-201ENST00000247225 CELF2-AS1Q8N7Q2 184 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 SETD9Q8NE22 299 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 OR8J3Q8NGG0 315 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 S100ZQ8WXG8 99 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 SLC35B4Q969S0 331 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 EID2BQ96D98 161 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 ACPTQ9BZG2 426 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 AKIP1Q9NQ31 210 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 ANKRD28O15084 1053 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 SLC22A1O15245 554 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 ACPPP15309 386 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 ITIH1P19827 911 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 CLCN7P51798 805 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 CHRNA6Q15825 494 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 STEAP3Q658P3 488 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 DESI1Q6ICB0 168 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 KCNJ9Q92806 393 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 DNASE1L2Q92874 299 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 RAD18Q9NS91 495 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 SIRT5Q9NXA8 310 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 THUMPD1Q9NXG2 353 aaKnown RBP16.42■□□□□ 0.22
SGPP1-201ENST00000247225 M0QZQ0 153 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 SAP18O00422 153 aaKnown RBP16.42■□□□□ 0.22
SGPP1-201ENST00000247225 SH3BP5O60239 455 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 TBL1XO60907 577 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 KRT6AP02538 564 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 KRT6BP04259 564 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 ASGR1P07306 291 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 PTGER3P43115 390 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 KRT6CP48668 564 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 TIGD6Q17RP2 521 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 TSPAN33Q86UF1 283 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 ZFYVE19Q96K21 471 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 ACOT13Q9NPJ3 140 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 DHRS7Q9Y394 339 aa16.42■□□□□ 0.22
SGPP1-201ENST00000247225 PCDHGA12O60330 932 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 CCNKO75909 580 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 ESR1P03372 595 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 IL6P05231 212 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 FABP3P05413 133 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 KRT8P05787 483 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 CRATP43155 626 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 GANABQ14697 944 aaKnown RBP16.41■□□□□ 0.22
SGPP1-201ENST00000247225 TRIB3Q96RU7 358 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 PALMDQ9NP74 551 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 IMPAD1Q9NX62 359 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 VPS9D1Q9Y2B5 631 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 NYNRINQ9P2P1 1898 aaKnown RBP16.41■□□□□ 0.22
SGPP1-201ENST00000247225 EPOP01588 193 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 KLKB1P03952 638 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 CD6P30203 668 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 RRM2P31350 389 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 HTR7P34969 479 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 SMARCB1Q12824 385 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 GBX1Q14549 363 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 TTC30BQ8N4P2 665 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 ATL1Q8WXF7 558 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 SH3KBP1Q96B97 665 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 RMND5AQ9H871 391 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 GORASP2Q9H8Y8 452 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 POPDC3Q9HBV1 291 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 KNL1Q8NG31 2342 aa16.41■□□□□ 0.22
SGPP1-201ENST00000247225 NDUFB5O43674 189 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 KRT75O95678 551 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 HUNKP57058 714 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 ACVR1Q04771 509 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.4■□□□□ 0.22
SGPP1-201ENST00000247225 MYLIPQ8WY64 445 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 STARD8Q92502 1023 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 ZFYVE1Q9HBF4 777 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 EHD3Q9NZN3 535 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 SNX6Q9UNH7 406 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 HTTP42858 3142 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 WASH4PA8MWX3 477 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 SMAD6O43541 496 aaKnown RBP16.4■□□□□ 0.22
SGPP1-201ENST00000247225 KIR3DL1P43629 444 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 PPP3CCP48454 512 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms