RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 ZNF548Q8NEK5 533 aaPredicted RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 EEF1AKMT1Q8WVE0 214 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 IPCEF1Q8WWN9 437 aaPredicted RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 TPD52L3Q96J77 140 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 PDCD10Q9BUL8 212 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 DUSP21Q9H596 190 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 ABCC13Q9NSE7 274 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 PAQR5Q9NXK6 330 aaPredicted RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 IKZF3Q9UKT9 509 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 KCNH4Q9UQ05 1017 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 PCDHGB6Q9Y5F9 930 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 PCDHGB1Q9Y5G3 927 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 PTCH2Q9Y6C5 1203 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 METTL21EPA6NDL7 271 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 STX16O14662 325 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 HMBSP08397 361 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 CHRNB1P11230 501 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 DARSP14868 501 aaKnown RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 ZNF280AP59817 542 aaPredicted RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 HMGCS1Q01581 520 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 OR2T5Q6IEZ7 315 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 GPR153Q6NV75 609 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 GDPD3Q7L5L3 318 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 AMIGO1Q86WK6 493 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 SLC22A15Q8IZD6 547 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 LIX1Q8N485 282 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 EFHBQ8N7U6 833 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 OR4K2Q8NGD2 314 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 OR2T29Q8NH02 315 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 MYDGFQ969H8 173 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 CDKN2AIPNLQ96HQ2 116 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 IPPKQ9H8X2 491 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 ELP3Q9H9T3 547 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 DCAF13Q9NV06 445 aaKnown RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 TMEM30AQ9NV96 361 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 OSGIN1Q9UJX0 560 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 TNFRSF10AO00220 468 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 ARNTLO00327 626 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 NIPSNAP2O75323 286 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 HAPLN1P10915 354 aaPredicted RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 HOXD11P31277 338 aaPredicted RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 ALDH6A1Q02252 535 aaKnown RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 CAMK2BQ13554 666 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 XKR7Q5GH72 579 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 LETMD1Q6P1Q0 360 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 ALKAL1Q6UXT8 129 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 GALNT13Q8IUC8 556 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 C7orf57Q8NEG2 295 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 OR4F6Q8NGB9 312 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 PPTC7Q8NI37 304 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 HASPINQ8TF76 798 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 Q96MT0 163 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 POLR1EQ9GZS1 481 aaKnown RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 POPDC3Q9HBV1 291 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 C1orf109Q9NX04 203 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 CRNNQ9UBG3 495 aaPredicted RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 GTF2A1LQ9UNN4 478 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 SSC5DA1L4H1 1573 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 COL1A2P08123 1366 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 A0A096LPI6 279 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 MROH6A6NGR9 719 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 CLDN24A6NM45 220 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 H3BN98 237 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 SNX4O95219 450 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 CRYZL1O95825 349 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 SERPINF2P08697 491 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 ITGA3P26006 1051 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 C21orf33P30042 268 aaPredicted RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 S100A3P33764 101 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 LIPAP38571 399 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 RPS7P62081 194 aaKnown RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 MXD1Q05195 221 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 ABRAXAS2Q15018 415 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 ATAD3CQ5T2N8 411 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 KIAA1614Q5VZ46 1190 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 GLT6D1Q7Z4J2 308 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 GALNT7Q86SF2 657 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 KRTCAP2Q8N6L1 136 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 OR6J1Q8NGC5 347 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 BRSK1Q8TDC3 778 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 ISG20Q96AZ6 181 aaKnown RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 IKZF5Q9H5V7 419 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 TXNRD2Q9NNW7 524 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 MALT1Q9UDY8 824 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 MKLN1Q9UL63 735 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 CLEC4AQ9UMR7 237 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 SNX6Q9UNH7 406 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 SAMD4AQ9UPU9 718 aaKnown RBP9.04□□□□□ -0.96
SRSF6-201ENST00000244020 HS3ST4Q9Y661 456 aa9.04□□□□□ -0.96
SRSF6-201ENST00000244020 C2orf81A6NN90 581 aa9.03□□□□□ -0.96
SRSF6-201ENST00000244020 ULK1O75385 1050 aa9.03□□□□□ -0.96
SRSF6-201ENST00000244020 OTCP00480 354 aa9.03□□□□□ -0.96
SRSF6-201ENST00000244020 FGF1P05230 155 aa9.03□□□□□ -0.96
SRSF6-201ENST00000244020 PRR35P0CG20 571 aa9.03□□□□□ -0.96
SRSF6-201ENST00000244020 OGNP20774 298 aaKnown RBP9.03□□□□□ -0.96
SRSF6-201ENST00000244020 ZFP36L2P47974 494 aaKnown RBP9.03□□□□□ -0.96
SRSF6-201ENST00000244020 MAD2L1Q13257 205 aaPredicted RBP9.03□□□□□ -0.96
SRSF6-201ENST00000244020 VARS2Q5ST30 1063 aaKnown RBP9.03□□□□□ -0.96
SRSF6-201ENST00000244020 SHQ1Q6PI26 577 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms