RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 LINC00299Q6ZSB3 139 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 RTN4RL1Q86UN2 441 aaPredicted RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 SERPINA9Q86WD7 417 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 PLD3Q8IV08 490 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 DENND1CQ8IV53 801 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 RAVER1Q8IY67 606 aaKnown RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 ENTHD1Q8IYW4 607 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 GLB1L3Q8NCI6 653 aaPredicted RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 PROX1Q92786 737 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 SH3GL1Q99961 368 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 TMEM184CQ9NVA4 438 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 SCN3BQ9NY72 215 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 WWOXQ9NZC7 414 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 VWA8A3KMH1 1905 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 A8MX80 341 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 DSCR3O14972 297 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 SSX4O60224 188 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 DNTTP04053 509 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 GADD45AP24522 165 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 RPS14P62263 151 aaKnown RBP12.07□□□□□ -0.48
NUP88-201ENST00000225696 ARF5P84085 180 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 ZXDBP98169 803 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 LRIT3Q3SXY7 679 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 ATXN7L2Q5T6C5 722 aaPredicted RBP12.07□□□□□ -0.48
NUP88-201ENST00000225696 SPATC1Q76KD6 591 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 ADGRG2Q8IZP9 1017 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 POC5Q8NA72 575 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 SETD9Q8NE22 299 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 ELMO1Q92556 727 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 WBP2Q969T9 261 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 FUBP3Q96I24 572 aaKnown RBP eCLIP12.07□□□□□ -0.48
NUP88-201ENST00000225696 PARK7Q99497 189 aaKnown RBP12.07□□□□□ -0.48
NUP88-201ENST00000225696 CTRCQ99895 268 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 BCL7BQ9BQE9 202 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 CLSTN3Q9BQT9 956 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 C6orf62Q9GZU0 229 aaPredicted RBP12.07□□□□□ -0.48
NUP88-201ENST00000225696 GABARAPL1Q9H0R8 117 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 KCNH6Q9H252 994 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 PARVBQ9HBI1 364 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 AASDHPPTQ9NRN7 309 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 GKN1Q9NS71 199 aa12.07□□□□□ -0.48
NUP88-201ENST00000225696 THG1LQ9NWX6 298 aaKnown RBP12.07□□□□□ -0.48
NUP88-201ENST00000225696 SCN10AQ9Y5Y9 1956 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 SLC28A1O00337 649 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 ACSL4O60488 711 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 ERN1O75460 977 aaKnown RBP12.06□□□□□ -0.48
NUP88-201ENST00000225696 DBTP11182 482 aaKnown RBP12.06□□□□□ -0.48
NUP88-201ENST00000225696 S100A3P33764 101 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 GRK3P35626 688 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 BMPR1AP36894 532 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 SLC19A1P41440 591 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 SEMG2Q02383 582 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 CTXN3Q4LDR2 81 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 GPR153Q6NV75 609 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 PRSS48Q7RTY5 328 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 ATG16L2Q8NAA4 619 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 USP7Q93009 1102 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 UROC1Q96N76 676 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 HCSTQ9UBK5 93 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 SAMHD1Q9Y3Z3 626 aaKnown RBP12.06□□□□□ -0.48
NUP88-201ENST00000225696 OARD1Q9Y530 152 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 H7C0S8 307 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 YY2O15391 372 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 PRAMEF1O95521 474 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 DLGAP3O95886 979 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 IL1RNP18510 177 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 SDC1P18827 310 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 SERPINB1P30740 379 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 CRYBA2P53672 197 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 CXCR4P61073 352 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 CACNG1Q06432 222 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 RING1Q06587 406 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 DUSP4Q13115 394 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 ARHGEF7Q14155 803 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 SF1Q15637 639 aaKnown RBP12.06□□□□□ -0.48
NUP88-201ENST00000225696 NFE2Q16621 373 aaPredicted RBP12.06□□□□□ -0.48
NUP88-201ENST00000225696 KIAA1614Q5VZ46 1190 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 DESI1Q6ICB0 168 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 FKBP9P1Q75LS8 142 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 TSPYL5Q86VY4 417 aaPredicted RBP12.06□□□□□ -0.48
NUP88-201ENST00000225696 ULK4Q96C45 1275 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 APIPQ96GX9 242 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 ADGRE3Q9BY15 652 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 FAM126AQ9BYI3 521 aaPredicted RBP12.06□□□□□ -0.48
NUP88-201ENST00000225696 GPR62Q9BZJ7 368 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 TM9SF3Q9HD45 589 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 KRT84Q9NSB2 600 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 MAN2B2Q9Y2E5 1009 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 ATP11BQ9Y2G3 1177 aa12.06□□□□□ -0.48
NUP88-201ENST00000225696 AGAP5A6NIR3 686 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 METTL15A6NJ78 407 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 M0R129 80 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 RFXANKO14593 260 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 WNT9AO14904 365 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 AIREO43918 545 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 KCNK5O95279 499 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 SEMG1P04279 462 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 NUDT7P0C024 238 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 DNAJA1P31689 397 aaKnown RBP12.05□□□□□ -0.48
NUP88-201ENST00000225696 GKP32189 559 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms