RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 KBTBD8Q8NFY9 601 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 EBF4Q9BQW3 602 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 MARCH7Q9H992 704 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 SLCO3A1Q9UIG8 710 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 DMTF1Q9Y222 760 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 PGRMC2O15173 223 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 ARFIP1P53367 373 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 PTGES3Q15185 160 aaKnown RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 KCTD21Q4G0X4 260 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 IFI44LQ53G44 452 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 SLC35A5Q9BS91 424 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 SNX7Q9UNH6 387 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 A0A1W2PQU0 124 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 PSMD9O00233 223 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 TPD52L2O43399 206 aaKnown RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 RBMXL2O75526 392 aaKnown RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 SCELO95171 688 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 ATP5A1P25705 553 aaKnown RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 STAT5AP42229 794 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 CDKN1CP49918 316 aaPredicted RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 LRRC70Q7Z2Q7 622 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 FAM13CQ8NE31 585 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 LRP6O75581 1613 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 FAM208AQ9UK61 1670 aaKnown RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 TLX3O43711 291 aaPredicted RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 GADD45GO95257 159 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 HOXA11P31270 313 aaPredicted RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 RPS21P63220 83 aaKnown RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 OR4F3Q6IEY1 312 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 OR4C6Q8NH72 309 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 CAPN8A6NHC0 703 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 SRRM3A6NNA2 597 aaPredicted RBP18■□□□□ 0.47
CLIP2-201ENST00000223398 STC2O76061 302 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 PGLSO95336 258 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 CHERPQ8IWX8 916 aaKnown RBP18■□□□□ 0.47
CLIP2-201ENST00000223398 LDHAL6BQ9BYZ2 381 aaPredicted RBP18■□□□□ 0.47
CLIP2-201ENST00000223398 ABCB10Q9NRK6 738 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 CHD2O14647 1828 aaKnown RBP18■□□□□ 0.47
CLIP2-201ENST00000223398 EPCAMP16422 314 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 RUNX3Q13761 415 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 SCARB2Q14108 478 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 ELOCQ15369 112 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 ZC3HC1Q86WB0 502 aaKnown RBP18■□□□□ 0.47
CLIP2-201ENST00000223398 GIPC3Q8TF64 312 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 MR1Q95460 341 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 COL21A1Q96P44 957 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18■□□□□ 0.47
CLIP2-201ENST00000223398 PLK4O00444 970 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 CDH1P12830 882 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 ZNF823P16415 610 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 DNASE1L1P49184 302 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 PPP2R2BQ00005 443 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 TTC9BQ8N6N2 239 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 NSMCE3Q96MG7 304 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 RBM4BQ9BQ04 359 aaKnown RBP18■□□□□ 0.47
CLIP2-201ENST00000223398 RBM4Q9BWF3 364 aaKnown RBP18■□□□□ 0.47
CLIP2-201ENST00000223398 RNF121Q9H920 327 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 S100A14Q9HCY8 104 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 ZNF860A6NHJ4 632 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 K7ERQ8 282 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 ITM2AO43736 263 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 ERVK-8P63133 956 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 AAGABQ6PD74 315 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 GOLGA7Q7Z5G4 137 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 PACS2Q86VP3 889 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 ZDHHC21Q8IVQ6 265 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 OR4F6Q8NGB9 312 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 NSUN3Q9H649 340 aaKnown RBP18■□□□□ 0.47
CLIP2-201ENST00000223398 HMG20AQ9NP66 347 aa18■□□□□ 0.47
CLIP2-201ENST00000223398 GLOD5A6NK44 160 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 CDC123O75794 336 aaPredicted RBP17.99■□□□□ 0.47
CLIP2-201ENST00000223398 OPN1SWP03999 348 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 MC1RQ01726 317 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 SLC5A11Q8WWX8 675 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 OXSMQ9NWU1 459 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 OR1I1O60431 355 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 ITGB1P05556 798 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 GRIA2P42262 883 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 STC1P52823 247 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 TARDBPQ13148 414 aaKnown RBP eCLIP17.99■□□□□ 0.47
CLIP2-201ENST00000223398 YTHDF3Q7Z739 585 aaKnown RBP17.99■□□□□ 0.47
CLIP2-201ENST00000223398 FITM2Q8N6M3 262 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 GLB1L3Q8NCI6 653 aaPredicted RBP17.99■□□□□ 0.47
CLIP2-201ENST00000223398 PDCD10Q9BUL8 212 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 PHF24Q9UPV7 400 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 ADAMDEC1O15204 470 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 CXCR1P25024 350 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 PTX3P26022 381 aaPredicted RBP17.99■□□□□ 0.47
CLIP2-201ENST00000223398 SEMA3AQ14563 771 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 MSS51Q4VC12 460 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 EIPR1Q53HC9 387 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 ZCCHC12Q6PEW1 402 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 NXPE1Q8N323 547 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 AVL9Q8NBF6 648 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 LRTOMTQ8WZ04 291 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 STX16-NPEPL1H3BU86 382 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 STX16O14662 325 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 CLUP10909 449 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 PIM1P11309 404 aaPredicted RBP17.99■□□□□ 0.47
CLIP2-201ENST00000223398 RPS13P62277 151 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms