RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 RHPN2P1A8MT19 583 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 KDELR3O43731 214 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 IDH3BO43837 385 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 PSIP1O75475 530 aaKnown RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 ATP1B2P14415 290 aaPredicted RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 AKT2P31751 481 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 GALK1P51570 392 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 CRISP3P54108 245 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 CASP9P55211 416 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 PTCHD3Q3KNS1 767 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 PRAMEF14Q5SWL7 426 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 PRAMEF13Q5VWM6 474 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 ZNF280BQ86YH2 543 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 C1orf52Q8N6N3 182 aaKnown RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 COX18Q8N8Q8 333 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 SNX33Q8WV41 574 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 SLC22A18Q96BI1 424 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 C11orf24Q96F05 449 aaPredicted RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 NARS2Q96I59 477 aaKnown RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 TSGA13Q96PP4 275 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 ZNF347Q96SE7 839 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 COPS4Q9BT78 406 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 POLR2J3Q9H1A7 115 aaKnown RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 NSUN3Q9H649 340 aaKnown RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 CD320Q9NPF0 282 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 TIMMDC1Q9NPL8 285 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 IL36AQ9UHA7 158 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 PGAP2Q9UHJ9 254 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 GPN3Q9UHW5 284 aaPredicted RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 INSL5Q9Y5Q6 135 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 WNT6Q9Y6F9 365 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 LOC730098B7Z3J9 87 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 SEPHS1P49903 392 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 CLCNKAP51800 687 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 CREB5Q02930 508 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 FPGSQ05932 587 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 MERTKQ12866 999 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 DAG1Q14118 895 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 UTS2BQ765I0 119 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 PRSS58Q8IYP2 241 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 AHI1Q8N157 1196 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 TTLQ8NG68 377 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 OR4F6Q8NGB9 312 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 DIRAS2Q96HU8 199 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 CDADC1Q9BWV3 514 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 KLHL31Q9H511 634 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 OAZ3Q9UMX2 235 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 HEBP2Q9Y5Z4 205 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 RP1L1Q8IWN7 2480 aaPredicted RBP11.24□□□□□ -0.61
NOD1-201ENST00000222823 TCRBV5S1A1TA0A578 114 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 AOC2O75106 756 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 RB1P06400 928 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 ADH5P11766 374 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 CSNK2A2P19784 350 aaPredicted RBP11.24□□□□□ -0.61
NOD1-201ENST00000222823 MPIP34949 423 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 GSK3BP49841 420 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 CCR8P51685 355 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 PTPRCAPQ14761 206 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 ZNF311Q5JNZ3 666 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 OR4F3Q6IEY1 312 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 LRRC70Q7Z2Q7 622 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 JAZF1Q86VZ6 243 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 SIPA1Q96FS4 1042 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 COL21A1Q96P44 957 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 GAL3ST4Q96RP7 486 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 DERL2Q9GZP9 239 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 NKIRAS2Q9NYR9 191 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 TVP23BQ9NYZ1 205 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 FLRT1Q9NZU1 646 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 WBP11Q9Y2W2 641 aaKnown RBP11.24□□□□□ -0.61
NOD1-201ENST00000222823 PRORSD1PA6NEY8 169 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 MATN2O00339 956 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 B3GALT2O43825 422 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 ZNF623O75123 536 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 KHDRBS3O75525 346 aaKnown RBP11.24□□□□□ -0.61
NOD1-201ENST00000222823 PRKD3O94806 890 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 DHFRP00374 187 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 ALOX5P09917 674 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 DHRS4L1P0CG22 281 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 ZNF30P17039 623 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 GDI1P31150 447 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 SOX4Q06945 474 aaPredicted RBP11.24□□□□□ -0.61
NOD1-201ENST00000222823 SLC13A2Q13183 592 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 TAZQ16635 292 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 SLC25A24Q6NUK1 477 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 EPGNQ6UW88 154 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 RNF19BQ6ZMZ0 732 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 KCTD8Q6ZWB6 473 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 TFGQ92734 400 aaPredicted RBP11.24□□□□□ -0.61
NOD1-201ENST00000222823 UBAP1Q9NZ09 502 aa11.24□□□□□ -0.61
NOD1-201ENST00000222823 DUXAA6NLW8 204 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 UPK3BL1B0FP48 263 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 UPK3BL2E5RIL1 263 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 FAM72CH0Y354 149 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 ARPC2O15144 300 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 VIPR1P32241 457 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 RPL26P61254 145 aaKnown RBP11.23□□□□□ -0.61
NOD1-201ENST00000222823 TARDBPQ13148 414 aaKnown RBP eCLIP11.23□□□□□ -0.61
NOD1-201ENST00000222823 DSC3Q14574 896 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 PCLAFQ15004 111 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms