RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 NUFIP1Q9UHK0 495 aaKnown RBP4.32□□□□□ -1.72
CHD9-201ENST00000219084 RNF6Q9Y252 685 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 MYO9BQ13459 2157 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ANKRD31Q8N7Z5 1873 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 A0A0G2JLL6 359 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 TCRBV7S2A1N4TA0A589 114 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 EI24O14681 340 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 RP2O75695 350 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 H1F0P07305 194 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 IDSP22304 550 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 AGTR1P30556 359 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 PLEKHS1Q5SXH7 462 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 OGFRL1Q5TC84 451 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 PRRT2Q7Z6L0 340 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 GALNT5Q7Z7M9 940 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 PSD4Q8NDX1 1056 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 GRIN3AQ8TCU5 1115 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 HASPINQ8TF76 798 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 APOLD1Q96LR9 279 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 SLC6A15Q9H2J7 730 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 POLR3BQ9NW08 1133 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 NPAP1Q9NZP6 1156 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 HCN3Q9P1Z3 774 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 GLS2Q9UI32 602 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 MAB21L2Q9Y586 359 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 OAS3Q9Y6K5 1087 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 NHSQ6T4R5 1651 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 NHSL1Q5SYE7 1610 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 DUSP11O75319 330 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 LRATO95237 230 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 LATS1O95835 1130 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TOP3BO95985 862 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 IST1P53990 364 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CLDN10P78369 228 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 C2orf80Q0P641 193 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 SCAPQ12770 1279 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CTC1Q2NKJ3 1217 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 GRHL2Q6ISB3 625 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CES5AQ6NT32 575 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 LINC00299Q6ZSB3 139 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 SERPINA9Q86WD7 417 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 OR10G2Q8NGC3 310 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 UPF1Q92900 1129 aaKnown RBP eCLIP4.31□□□□□ -1.72
CHD9-201ENST00000219084 EMID1Q96A84 441 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 TMEM175Q9BSA9 504 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 PLEKHA1Q9HB21 404 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TLR4O00206 839 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TFECO14948 347 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 TSPAN3O60637 253 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 RB1P06400 928 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 HSD17B1P14061 328 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TM4SF1P30408 202 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CORO1AP31146 461 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 DNASE1L1P49184 302 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 LSM3P62310 102 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 SLC13A2Q13183 592 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 NFE2L1Q14494 772 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 SLC9B1Q4ZJI4 515 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 FRG2Q64ET8 278 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CLEC6AQ6EIG7 209 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 RNF44Q7L0R7 432 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 OR4C15Q8NGM1 316 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TRAPPC12Q8WVT3 735 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 HMCESQ96FZ2 354 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ART5Q96L15 291 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 FRG2BQ96QU4 278 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 FAM83DQ9H4H8 585 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 AKTIPQ9H8T0 292 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CAPN10Q9HC96 672 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TCF7L1Q9HCS4 588 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 MYNNQ9NPC7 610 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 FANCFQ9NPI8 374 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TMEM248Q9NWD8 314 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ZNF639Q9UID6 485 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 FBXO9Q9UK97 447 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 WASF2Q9Y6W5 498 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 DDX60LQ5H9U9 1706 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 TTC3P53804 2025 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 SOBPA7XYQ1 873 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CCRL2O00421 344 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 SNNO75324 88 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 FAM155BO75949 473 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CYB5AP00167 134 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 BMP2P12643 396 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 HOXC8P31273 242 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 GNALP38405 381 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 DGKGP49619 791 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CDH12P55289 794 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CRTC2Q53ET0 693 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 PPM1JQ5JR12 505 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 C9orf64Q5T6V5 341 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 NCBP2-AS2Q69YL0 99 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 FRRS1Q6ZNA5 592 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ZNF767PQ75MW2 155 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ASRGL1Q7L266 308 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TAF8Q7Z7C8 310 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 KCNJ9Q92806 393 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 NXPE2Q96DL1 559 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 S100A16Q96FQ6 103 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms