RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 OXA1LQ15070 435 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 TRIM16LQ309B1 348 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 PGS1Q32NB8 556 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 SLCO6A1Q86UG4 719 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 RNF168Q8IYW5 571 aaPredicted RBP12.95□□□□□ -0.34
SRP54-201ENST00000216774 ADGRG2Q8IZP9 1017 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 MINDY2Q8NBR6 621 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 OR6K2Q8NGY2 324 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 NELL1Q92832 810 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 TSSK3Q96PN8 268 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 APOL4Q9BPW4 351 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 NEURL2Q9BR09 285 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 CCNB1IP1Q9NPC3 277 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 EXD2Q9NVH0 621 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 GIN1Q9NXP7 522 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 RPS6KA6Q9UK32 745 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 FBXO10Q9UK96 956 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 MITFO75030 526 aaPredicted RBP12.95□□□□□ -0.34
SRP54-201ENST00000216774 SEC24AO95486 1093 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 ZNF682O95780 498 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 SELPP16109 830 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 RPL17P18621 184 aaKnown RBP12.95□□□□□ -0.34
SRP54-201ENST00000216774 FPR1P21462 350 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 DNAJA1P31689 397 aaKnown RBP12.95□□□□□ -0.34
SRP54-201ENST00000216774 CDKN2CP42773 168 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 SERPINB10P48595 397 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 HNMTP50135 292 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 SMAD3P84022 425 aaKnown RBP12.95□□□□□ -0.34
SRP54-201ENST00000216774 MTAPQ13126 283 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 TAF12Q16514 161 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 CARD16Q5EG05 197 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 SYT6Q5T7P8 510 aaPredicted RBP12.95□□□□□ -0.34
SRP54-201ENST00000216774 ERICH5Q6P6B1 374 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 DOK6Q6PKX4 331 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 NEK10Q6ZWH5 1172 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 GALNT5Q7Z7M9 940 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 ANKRD46Q86W74 232 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 PAF1Q8N7H5 531 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 L3MBTL4Q8NA19 623 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 SLC43A3Q8NBI5 491 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 DBF4BQ8NFT6 615 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 CSGALNACT1Q8TDX6 532 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 YIPF6Q96EC8 236 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 MAGEB10Q96LZ2 347 aaPredicted RBP12.95□□□□□ -0.34
SRP54-201ENST00000216774 ALPK1Q96QP1 1244 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 LYSMD1Q96S90 227 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 SLC12A9Q9BXP2 914 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 RIBC2Q9H4K1 309 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 ATP13A3Q9H7F0 1226 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 RRAGCQ9HB90 399 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 FBXO8Q9NRD0 319 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 AASDHPPTQ9NRN7 309 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 THG1LQ9NWX6 298 aaKnown RBP12.95□□□□□ -0.34
SRP54-201ENST00000216774 ERVK-18Q9QC07 812 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 PAIP2BQ9ULR5 123 aaKnown RBP12.95□□□□□ -0.34
SRP54-201ENST00000216774 ABCG2Q9UNQ0 655 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 DOLKQ9UPQ8 538 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 PCDHGA10Q9Y5H3 936 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 CPQQ9Y646 472 aa12.95□□□□□ -0.34
SRP54-201ENST00000216774 CASP8AP2Q9UKL3 1982 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 M0R3G1 203 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 ATP6V1G1O75348 118 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 JRKO75564 520 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 EFEMP2O95967 443 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 SEMG1P04279 462 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 C8GP07360 202 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 ELNP15502 786 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 PRPS1L1P21108 318 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 NR4A1P22736 598 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 TACR1P25103 407 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 TPP2P29144 1249 aaPredicted RBP12.94□□□□□ -0.34
SRP54-201ENST00000216774 GRK3P35626 688 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 MAGEA8P43361 318 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 KIR3DL1P43629 444 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 DAPP51397 102 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 PLD1Q13393 1074 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 NPTX1Q15818 432 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 GPR162Q16538 588 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 DGUOKQ16854 277 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 DUOXA1Q1HG43 343 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 LDLRAP1Q5SW96 308 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 CEP68Q76N32 757 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 ZNF551Q7Z340 670 aaPredicted RBP12.94□□□□□ -0.34
SRP54-201ENST00000216774 PIWIL3Q7Z3Z3 882 aaKnown RBP12.94□□□□□ -0.34
SRP54-201ENST00000216774 METTL3Q86U44 580 aaKnown RBP12.94□□□□□ -0.34
SRP54-201ENST00000216774 SAPCD2Q86UD0 394 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 P2RY8Q86VZ1 359 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 SVOPQ8N4V2 548 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 ZDHHC3Q9NYG2 299 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 NDRG4Q9ULP0 352 aaKnown RBP12.94□□□□□ -0.34
SRP54-201ENST00000216774 GMPPBQ9Y5P6 360 aa12.94□□□□□ -0.34
SRP54-201ENST00000216774 SMAD6O43541 496 aaKnown RBP12.93□□□□□ -0.34
SRP54-201ENST00000216774 PRMT3O60678 531 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 NBNO60934 754 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 FABP3P05413 133 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 CD6P30203 668 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 SLC6A12P48065 614 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 CLK3P49761 638 aaKnown RBP12.93□□□□□ -0.34
SRP54-201ENST00000216774 ST13P50502 369 aaKnown RBP12.93□□□□□ -0.34
SRP54-201ENST00000216774 CYP2A13Q16696 494 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms