RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 ZCCHC18P0CG32 403 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 F3P13726 295 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 MAP4P27816 1152 aaKnown RBP9.67□□□□□ -0.86
RTCB-201ENST00000216038 SERPINB3P29508 390 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 AGTR2P50052 363 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 NUBP1P53384 320 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 KRT33BQ14525 404 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 ELOCQ15369 112 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 RPE65Q16518 533 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 PEAR1Q5VY43 1037 aaPredicted RBP9.67□□□□□ -0.86
RTCB-201ENST00000216038 NEK10Q6ZWH5 1172 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 CLNKQ7Z7G1 428 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 NUDCD3Q8IVD9 361 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 C2orf73Q8N5S3 287 aaPredicted RBP9.67□□□□□ -0.86
RTCB-201ENST00000216038 MPP4Q96JB8 637 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 FERD3LQ96RJ6 166 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 MIPEPQ99797 713 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 SLC12A9Q9BXP2 914 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 GAREM1Q9H706 876 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 CAPN10Q9HC96 672 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 SPASTQ9UBP0 616 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 ASB1Q9Y576 335 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 SNRNP200O75643 2136 aaKnown RBP9.67□□□□□ -0.86
RTCB-201ENST00000216038 RP1P56715 2156 aa9.67□□□□□ -0.86
RTCB-201ENST00000216038 ASCC3Q8N3C0 2202 aaKnown RBP9.67□□□□□ -0.86
RTCB-201ENST00000216038 A6NCN8 305 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 A8MT66 165 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 KCNJ13O60928 360 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 CBX6O95503 412 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 CATP04040 527 aaKnown RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 BPGMP07738 259 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 HIST1H2AGP0C0S8 130 aaPredicted RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 HIST1H2ADP20671 130 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 CYP2A7P20853 494 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 BGNP21810 368 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 HALP42357 657 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 GDF5P43026 501 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 CCR10P46092 362 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 ARRB1P49407 418 aaPredicted RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 AP2B1P63010 937 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 ASPHQ12797 758 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 KRT72Q14CN4 511 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 SHBQ15464 509 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.66□□□□□ -0.86
RTCB-201ENST00000216038 C6orf163Q5TEZ5 329 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 CES4AQ5XG92 561 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 FAM91A1Q658Y4 838 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 ZYG11AQ6WRX3 759 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 NAGSQ8N159 534 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 SLC25A45Q8N413 288 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 FBXO39Q8N4B4 442 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 CCNYL1Q8N7R7 359 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 PTGR2Q8N8N7 351 aaPredicted RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 CEP76Q8TAP6 659 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 MCOLN3Q8TDD5 553 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 PYCR2Q96C36 320 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 NSL1Q96IY1 281 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 HIST1H2AHQ96KK5 128 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 IL17FQ96PD4 163 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 HIST1H2AJQ99878 128 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 H2AFJQ9BTM1 129 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 NCKIPSDQ9NZQ3 722 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 ZNF624Q9P2J8 865 aaPredicted RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 OARD1Q9Y530 152 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 WDFY3Q8IZQ1 3526 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 PCDH15Q96QU1 1955 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 PABPN1LA6NDY0 278 aaKnown RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 SYCE1LA8MT33 242 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 DLL1O00548 723 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 EPN2O95208 641 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 SLC16A8O95907 504 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 MTHFD1P11586 935 aaKnown RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 MYF5P13349 255 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 TSPAN8P19075 237 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 HOXD12P35452 270 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 SLC19A1P41440 591 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 NAGLUP54802 743 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 MED21Q13503 144 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 TSTA3Q13630 321 aaPredicted RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 CHI3L2Q15782 390 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 ZXDCQ2QGD7 858 aaPredicted RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 TRMT5Q32P41 509 aaKnown RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 IYDQ6PHW0 289 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 SLC23A3Q6PIS1 610 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 ABRAXAS1Q6UWZ7 409 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 NET1Q7Z628 596 aaPredicted RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 ZNF761Q86XN6 746 aaPredicted RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 OR5K2Q8NHB8 316 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 ZDHHC1Q8WTX9 485 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 ATOH1Q92858 354 aaPredicted RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 CXorf40BQ96DE9 158 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 PTCD3Q96EY7 689 aaKnown RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 PKP4Q99569 1192 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 TRIM54Q9BYV2 358 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 ATG10Q9H0Y0 220 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 XKR8Q9H6D3 395 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 ZNF395Q9H8N7 513 aaPredicted RBP9.66□□□□□ -0.86
RTCB-201ENST00000216038 ERVMER34-1Q9H9K5 563 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 OXSMQ9NWU1 459 aa9.66□□□□□ -0.86
RTCB-201ENST00000216038 SLC6A14Q9UN76 642 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms