RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TEAD4Q15561 434 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 CACUL1Q86Y37 369 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 TICAM1Q8IUC6 712 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 XAGE5Q8WWM1 108 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 OR8D1Q8WZ84 308 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 RERGQ96A58 199 aaPredicted RBP10.22□□□□□ -0.77
VCL-201ENST00000211998 CGREF1Q99674 301 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 PPA2Q9H2U2 334 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 SIX2Q9NPC8 291 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 KIAA1522Q9P206 1035 aaPredicted RBP10.22□□□□□ -0.77
VCL-201ENST00000211998 COPZ2Q9P299 210 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 TCAF1Q9Y4C2 921 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 PCDHGA4Q9Y5G9 962 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 SPARCP09486 303 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 GTF2H2Q13888 395 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 GTF2H2CQ6P1K8 395 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 SLC51AQ86UW1 340 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 REM2Q8IYK8 340 aaPredicted RBP10.22□□□□□ -0.77
VCL-201ENST00000211998 C12orf29Q8N999 325 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 HSPA12BQ96MM6 686 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 TMEM74Q96NL1 305 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 TBX5Q99593 518 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 GPR21Q99679 349 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 IFT27Q9BW83 186 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 TCF7L1Q9HCS4 588 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 POFUT2Q9Y2G5 429 aa10.22□□□□□ -0.77
VCL-201ENST00000211998 SOCS2O14508 198 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 TLR5O60602 858 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 RAB3BP20337 219 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 ARCN1P48444 511 aaKnown RBP10.21□□□□□ -0.77
VCL-201ENST00000211998 XKP51811 444 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 ERVK-8P63133 956 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 GALEQ14376 348 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 SLC25A52Q3SY17 297 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 DUSP28Q4G0W2 176 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 PRAMEF19Q5SWL8 479 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 UBAP2Q5T6F2 1119 aaKnown RBP10.21□□□□□ -0.77
VCL-201ENST00000211998 KIAA1614Q5VZ46 1190 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 GLB1L3Q8NCI6 653 aaPredicted RBP10.21□□□□□ -0.77
VCL-201ENST00000211998 CCDC32Q9BV29 185 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 TRIM2Q9C040 744 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 LMAN2LQ9H0V9 348 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 GBA3Q9H227 469 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 CNOT11Q9UKZ1 510 aaKnown RBP10.21□□□□□ -0.77
VCL-201ENST00000211998 MAFFQ9ULX9 164 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 SLC27A6Q9Y2P4 619 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 ACSL4O60488 711 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 CSN2P05814 226 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 SLC35G4P0C7Q5 338 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 LAG3P18627 525 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 EFNA1P20827 205 aaPredicted RBP10.21□□□□□ -0.77
VCL-201ENST00000211998 KELP23276 732 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 ITPKAP23677 461 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 KCNAB2Q13303 367 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 ATXN7L3Q14CW9 347 aaPredicted RBP10.21□□□□□ -0.77
VCL-201ENST00000211998 ATP6AP1Q15904 470 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 RABL3Q5HYI8 236 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 C9orf57Q5W0N0 161 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 ESRP1Q6NXG1 681 aaKnown RBP10.21□□□□□ -0.77
VCL-201ENST00000211998 MSANTD2Q6P1R3 559 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 CRTC1Q6UUV9 634 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 LRRC69Q6ZNQ3 347 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 QSOX2Q6ZRP7 698 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.21□□□□□ -0.77
VCL-201ENST00000211998 UBQLNLQ8IYU4 475 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 Q8N402 240 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 TCTEX1D2Q8WW35 142 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 LHPPQ9H008 270 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 SGK2Q9HBY8 427 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 TMPRSS4Q9NRS4 437 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 AJAP1Q9UKB5 411 aaPredicted RBP10.21□□□□□ -0.77
VCL-201ENST00000211998 FZD1Q9UP38 647 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 GPSM3Q9Y4H4 160 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 FER1L4A9Z1Z3 1794 aa10.21□□□□□ -0.77
VCL-201ENST00000211998 C1orf196B1AJZ1 125 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 SGCEO43556 437 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 B4GALT4O60513 344 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 UPK1BO75841 260 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 CLDN9O95484 217 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 FGBP02675 491 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 ITGB5P18084 799 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 HK1P19367 917 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 S100GP29377 79 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 CDKN2CP42773 168 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 ASMTP46597 345 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 HSPA7P48741 367 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 NCS1P62166 190 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 ABRQ12979 859 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 SH3PXD2AQ5TCZ1 1133 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 KIAA1161Q6NSJ0 714 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 PCDH19Q8TAB3 1148 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 PIGXQ8TBF5 258 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 LPPQ93052 612 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 TM6SF2Q9BZW4 377 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 ARL6Q9H0F7 186 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 RHBGQ9H310 441 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 ABCB8Q9NUT2 735 aa10.21□□□□□ -0.78
VCL-201ENST00000211998 NUFIP1Q9UHK0 495 aaKnown RBP10.21□□□□□ -0.78
VCL-201ENST00000211998 EIF2B4Q9UI10 523 aaKnown RBP10.21□□□□□ -0.78
VCL-201ENST00000211998 GLS2Q9UI32 602 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms