RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 ZNF282Q9UDV7 671 aaPredicted RBP18.4■□□□□ 0.54
MBD3-201ENST00000156825 STC1P52823 247 aa18.4■□□□□ 0.54
MBD3-201ENST00000156825 SERINC3Q13530 473 aa18.4■□□□□ 0.54
MBD3-201ENST00000156825 SCARB2Q14108 478 aa18.4■□□□□ 0.54
MBD3-201ENST00000156825 RABL3Q5HYI8 236 aa18.4■□□□□ 0.54
MBD3-201ENST00000156825 TP53INP2Q8IXH6 220 aa18.4■□□□□ 0.54
MBD3-201ENST00000156825 OR6K6Q8NGW6 343 aa18.4■□□□□ 0.54
MBD3-201ENST00000156825 CGREF1Q99674 301 aa18.4■□□□□ 0.54
MBD3-201ENST00000156825 PNO1Q9NRX1 252 aaKnown RBP18.4■□□□□ 0.54
MBD3-201ENST00000156825 PRPS1L1P21108 318 aa18.4■□□□□ 0.54
MBD3-201ENST00000156825 CCR3P51677 355 aa18.4■□□□□ 0.54
MBD3-201ENST00000156825 RANBP3LQ86VV4 465 aaPredicted RBP18.4■□□□□ 0.54
MBD3-201ENST00000156825 THOC6Q86W42 341 aaKnown RBP18.4■□□□□ 0.54
MBD3-201ENST00000156825 SMG8Q8ND04 991 aaKnown RBP18.4■□□□□ 0.54
MBD3-201ENST00000156825 HM13Q8TCT9 377 aa18.4■□□□□ 0.54
MBD3-201ENST00000156825 NALCNQ8IZF0 1738 aa18.4■□□□□ 0.54
MBD3-201ENST00000156825 KDELR3O43731 214 aa18.39■□□□□ 0.54
MBD3-201ENST00000156825 AIREO43918 545 aa18.39■□□□□ 0.54
MBD3-201ENST00000156825 PRAMEF11O60813 436 aa18.39■□□□□ 0.54
MBD3-201ENST00000156825 VIPR1P32241 457 aa18.39■□□□□ 0.54
MBD3-201ENST00000156825 MC1RQ01726 317 aa18.39■□□□□ 0.54
MBD3-201ENST00000156825 GOLGA7Q7Z5G4 137 aa18.39■□□□□ 0.54
MBD3-201ENST00000156825 IGSF21Q96ID5 467 aa18.39■□□□□ 0.54
MBD3-201ENST00000156825 KLHL31Q9H511 634 aa18.39■□□□□ 0.54
MBD3-201ENST00000156825 MALT1Q9UDY8 824 aa18.39■□□□□ 0.54
MBD3-201ENST00000156825 ACTR3P61158 418 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 ZNF648Q5T619 568 aaPredicted RBP18.39■□□□□ 0.53
MBD3-201ENST00000156825 ATCAYQ86WG3 371 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 NUDT13Q86X67 352 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 LEMD2Q8NC56 503 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 S100ZQ8WXG8 99 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 POLR2J3Q9H1A7 115 aaKnown RBP18.39■□□□□ 0.53
MBD3-201ENST00000156825 NEK6Q9HC98 313 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 PHF11Q9UIL8 331 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 FAM240BA0A1B0GVZ2 78 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 ARPC2O15144 300 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 PGLSO95336 258 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 DBIP07108 87 aaKnown RBP18.39■□□□□ 0.53
MBD3-201ENST00000156825 CCNFP41002 786 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 TCEAL5Q5H9L2 206 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 C1orf220Q5T0J3 134 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 ANO7Q6IWH7 933 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 P2RY8Q86VZ1 359 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 GRHL3Q8TE85 626 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 TMEM40Q8WWA1 233 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 IGSF8Q969P0 613 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 TOP1MTQ969P6 601 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 TYRP1P17643 537 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 LAPTM4AQ15012 233 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 OR4C6Q8NH72 309 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 RNF31Q96EP0 1072 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 ZNF317Q96PQ6 595 aaPredicted RBP18.39■□□□□ 0.53
MBD3-201ENST00000156825 GLOD5A6NK44 160 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 PSMD9O00233 223 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 MAGEB3O15480 346 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 REM1O75628 298 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 BTN3A2P78410 334 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 MCEMP1Q8IX19 187 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 MCCC1Q96RQ3 725 aaPredicted RBP18.39■□□□□ 0.53
MBD3-201ENST00000156825 EFCAB11Q9BUY7 163 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 ITM2CQ9NQX7 267 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 KNL1Q8NG31 2342 aa18.39■□□□□ 0.53
MBD3-201ENST00000156825 NUMA1Q14980 2115 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 SOD2P04179 222 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 MPIP34949 423 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 DHPSP49366 369 aaPredicted RBP18.38■□□□□ 0.53
MBD3-201ENST00000156825 DSC3Q14574 896 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 SPANXN4Q5MJ08 99 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 LAPTM4BQ86VI4 370 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 COPS4Q9BT78 406 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 TMEM248Q9NWD8 314 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 COPS7AQ9UBW8 275 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 PHF24Q9UPV7 400 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 IRAK3Q9Y616 596 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 CACNA1FO60840 1977 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 LMO7Q8WWI1 1683 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 PAK4O96013 591 aaPredicted RBP18.38■□□□□ 0.53
MBD3-201ENST00000156825 PRKAR1AP10644 381 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 VARSP26640 1264 aaKnown RBP18.38■□□□□ 0.53
MBD3-201ENST00000156825 GNALP38405 381 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 PNLIPRP1P54315 467 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 MBOAT1Q6ZNC8 495 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 LRRC17Q8N6Y2 441 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 SLC25A36Q96CQ1 311 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 KCNS3Q9BQ31 491 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 USP29Q9HBJ7 922 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 HOXB2P14652 356 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 BLKP51451 505 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 CRISP3P54108 245 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 SLC10A2Q12908 348 aaPredicted RBP18.38■□□□□ 0.53
MBD3-201ENST00000156825 PCLAFQ15004 111 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 AGTRAPQ6RW13 159 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 KCNC2Q96PR1 638 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 GPATCH1Q9BRR8 931 aaKnown RBP18.38■□□□□ 0.53
MBD3-201ENST00000156825 ANKHQ9HCJ1 492 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 TNFRSF10BO14763 440 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 CYP11A1P05108 521 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 CDH15P55291 814 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 TGFBIQ15582 683 aa18.38■□□□□ 0.53
MBD3-201ENST00000156825 OLFML2AQ68BL7 652 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms