RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ndrg4Q8BTG7 352 aaKnown RBP9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Dppa4Q8CCG4 296 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Wdr47Q8CGF6 920 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Noxa1Q8CJ00 444 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 N4bp2l2Q8JZS6 575 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc36a1Q8K4D3 475 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 GlyatQ91XE0 296 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cryzl1Q921W4 348 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slco1a6Q99J94 670 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc5a5Q99PN0 618 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pttg1Q9CQJ7 199 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 NmbQ9CR53 121 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Dcdc2cQ9D1B8 347 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Hyal6Q9D4E9 494 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Prkar1aQ9DBC7 381 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 QkiQ9QYS9 341 aaKnown RBP9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Fzd9Q9R216 592 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 March7Q9WV66 693 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ate1Q9Z2A5 516 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 BC024063A0A1W2P7G7 749 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr1200A2ATJ4 336 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 SiglechB7ZMQ6 332 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Tatdn2B7ZNL9 783 aaKnown RBP9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 NagluO88325 739 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Hipk1O88904 1210 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Tgm2P21981 686 aaKnown RBP9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 PthlhP22858 175 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 StamP70297 548 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Npas1P97459 594 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ctf1Q60753 203 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 PcnpQ6P8I4 178 aaKnown RBP9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 P2ry10Q8BFU7 328 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Galnt12Q8BGT9 576 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Susd4Q8BH32 490 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Scara3Q8C850 606 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ces2aQ8QZR3 558 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 SuoxQ8R086 546 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Hbp1Q8R316 516 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 PpcsQ8VDG5 311 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 EedQ921E6 441 aaKnown RBP9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Mri1Q9CQT1 369 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cap2Q9CYT6 476 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pbdc1Q9D0B6 198 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Exoc2Q9D4H1 924 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 MioxQ9QXN5 285 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Rps6ka2Q9WUT3 733 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Clec2iQ9WVF9 217 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Trim30bE9PVL6 203 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Vmn2r55G3UWZ4 781 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr603L7N1Y4 312 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 MyocO70624 490 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Mup5P11591 180 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 TfamP40630 243 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Eif1P48024 113 aaKnown RBP9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Psma2P49722 234 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Uck1P52623 277 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 GcgP55095 180 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 MylpfP97457 169 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 TekQ02858 1122 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 BtrcQ3ULA2 605 aaKnown RBP9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cyp2j13Q3UNV4 503 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 1810049J17RikQ3V2G9 153 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cyp1b1Q64429 543 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 MffQ6PCP5 291 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gpatch2lQ6PE65 482 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Mrps7Q80X85 242 aaKnown RBP9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc7a4Q8BLQ7 635 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Fra10ac1Q8BP78 315 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ugt2a3Q8BWQ1 534 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Sept10Q8C650 452 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ago4Q8CJF8 861 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 HpdlQ8K248 371 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gabarapl1Q8R3R8 117 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Sla2Q8R4L0 259 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr791Q8VGJ0 312 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Trps1Q925H1 1281 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Mrps18aQ99N85 196 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Glod4Q9CPV4 298 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Eif1bQ9CXU9 113 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Mrpl4Q9DCU6 294 aaKnown RBP9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Lpar3Q9EQ31 354 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Nif3l1Q9EQ80 376 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cyp3a41aQ9JMA7 504 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pkp3Q9QY23 797 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cdh22Q9WTP5 813 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Bag6Q9Z1R2 1154 aaKnown RBP9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 H2afb1S4R1E0 115 aa9.51□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gm6592A2AHC7 168 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr420E9Q4G0 321 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr427E9Q7E7 315 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Il10P18893 178 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 ThP24529 498 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Tgfb2P27090 414 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Acsm3Q3UNX5 580 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cyp2c67Q569X9 491 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Usp7Q6A4J8 1103 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cd3eapQ76KJ5 399 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Nceh1Q8BLF1 408 aaKnown RBP9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Bnc2Q8BMQ3 1127 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc24a5Q8C261 501 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 55.7 ms