RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 AuhQ9JLZ3 314 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gng13Q9JMF3 67 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Clec4aQ9QZ15 238 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Vmn1r238E9Q373 306 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr689Q8VG18 320 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Imp3Q921Y2 184 aaKnown RBP13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Znf609Q8BZ47 1413 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Flvcr1B2RXV4 560 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Hnrnph3D3Z3N4 346 aaKnown RBP13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 LatO54957 242 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 H2-Q8P14430 326 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 H2-Q6P79568 326 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Prkd1Q62101 918 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr684Q7TRN8 312 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cdkl3Q8BLF2 595 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 E330021D16RikQ8BW45 371 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tmem53Q9D0Z3 276 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Adamts7Q68SA9 1657 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Zbtb10E9Q8X5 861 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Klrb1bP27812 223 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Klrb1cP27814 223 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cd63P41731 238 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tmem69Q3KQJ0 245 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Pyroxd2Q3U4I7 581 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tm7sf2Q71KT5 418 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ppp1r11Q8K1L5 131 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Prokr2Q8K458 381 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Rai2Q9QVY8 529 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Rimbp3Q3V0F0 1606 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Apoa2P09813 102 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cyp2a5P20852 494 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 ItgavP43406 1044 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Taf1aP97357 453 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 KizQ3UXL4 695 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mindy2Q6PDI6 601 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr1062Q7TR71 315 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 KptnQ8VCX6 430 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Oas1hQ8VI97 369 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Pdia5Q921X9 517 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ska1Q9CPV1 254 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mllt3A2AM29 569 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Fkbp14P59024 211 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 PdgfrlQ6PE55 375 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr1313Q7TQW8 311 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Slc34a3Q80SU6 601 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ccser1Q8C0C4 895 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Unc93b1Q8VCW4 598 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 ItpaQ9D892 198 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Vwa7Q9JHA8 891 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tpk1Q9R0M5 243 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Uba2Q9Z1F9 638 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Rgs6Q9Z2H2 472 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gm266A6H634 200 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Sox2P48432 319 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Slc20a1Q61609 681 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tas2r136Q7TQA8 305 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 ReltQ8BX43 436 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Kdm1bQ8CIG3 826 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Nudt4Q8R2U6 179 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mfsd5Q921Y4 450 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ccdc3Q9D6Y1 273 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Slc7a7Q9Z1K8 510 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Psmc3ipO35047 217 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Hsd11b1P50172 292 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Kcnj13P86046 360 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Zfp429Q7M6Y0 485 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Dusp12Q9D0T2 339 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Slc29a1Q9JIM1 460 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr49Q9Z1V0 313 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 D3Z070 196 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Zfp282E9PVC2 666 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 H2-M11F6U8V3 335 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Csf1P07141 552 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mef2dQ63943 514 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Pkp4Q68FH0 1190 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Arl11Q6P3A9 176 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Clba1Q8BHN9 321 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gpr89aQ8BS95 455 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Izumo1Q9D9J7 397 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Slc19a2Q9EQN9 498 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Igdcc4Q9EQS9 1252 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Sac3d1A6H687 427 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Nkx1-1G3UXB3 402 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 AoahO35298 574 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 RptnP97347 1118 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Map3k3Q61084 626 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gdi2Q61598 445 aaKnown RBP13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Lingo3Q6GQU6 589 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr58Q7TRF6 309 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Phtf2Q8CB19 747 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Faim2Q8K097 317 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gtf2f2Q8R0A0 249 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ptcd2Q8R3K3 381 aaKnown RBP13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Slc22a4Q9Z306 553 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gm8127E9Q0P0 100 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Zfp938E9Q9G3 579 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 MutP16332 748 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ap5b1Q3TAP4 876 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cldn11Q60771 207 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 StyxQ60969 223 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms