RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Tm9sf2P58021 662 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Parp8Q3UD82 852 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Kif18bQ6PFD6 834 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr1313Q7TQW8 311 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Arhgef38Q80VK6 770 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Vmn2r81Q80Z09 865 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Zfp595Q8BIN6 625 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 ReltQ8BX43 436 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Q8CC96 669 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Gm5591Q8CDK1 855 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 B3gnt7Q8K0J2 397 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Q9CXL3 195 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rfc5Q9D0F6 339 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Tor1aQ9ER39 333 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Fezf2Q9ESP5 455 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 DguokQ9QX60 277 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Gm10718D3Z1I7 227 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Vmn2r90E9PXJ8 863 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Sh3yl1O08641 340 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Kif1cO35071 1100 aaKnown RBP15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Arl6O88848 186 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 LckP06240 509 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Fth1P09528 182 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Prf1P10820 554 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Prdx3P20108 257 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ipcef1Q5DU31 406 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Snx31Q6P8Y7 439 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Mfn2Q80U63 757 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 C2cd4bQ80XU5 340 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Q810N5 247 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Phtf2Q8CB19 747 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Clec4a3Q8JZX6 237 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Pnpla8Q8K1N1 776 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Appl1Q8K3H0 707 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr575Q8VH16 318 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 MpstQ99J99 297 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 MispQ9D279 648 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Cyp2c55Q9D816 490 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Dlgap4B1AZP2 992 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Acbd4E9Q289 327 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Zfr2E9Q5M4 874 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 AmbnO55189 407 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Mtnd1P03888 318 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Bmp6P20722 510 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Lpcat1Q3TFD2 534 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr381Q5SSP0 311 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 VwdeQ6DFV8 926 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr169Q7TS53 313 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 RragdQ7TT45 449 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Adamtsl4Q80T21 1036 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Slc2a12Q8BFW9 622 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 DglucyQ8BH86 617 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Prdm8Q8BZ97 687 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Lacc1Q8BZT9 430 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ccdc17Q8CE13 565 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Vmn1r30Q8R2D2 302 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ccdc59Q8R2N0 240 aaKnown RBP15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ttc4Q8R3H9 386 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Mtfr2Q8VED8 361 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rps6kb2Q9Z1M4 485 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Vsig10l2A0A140LHF2 776 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Wsb2O54929 404 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Aif1O70200 147 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Emp1P47801 160 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Hdac2P70288 488 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Spata48Q5NC83 441 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Clec4a4Q5YIR8 236 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 PtprnQ60673 979 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 FaddQ61160 205 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Pdcd4Q61823 469 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Dsg1bQ7TSF1 1060 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr1047Q8VGS0 319 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 FcrlaQ920A9 352 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rpl34Q9D1R9 117 aaKnown RBP15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Plpp6Q9D4F2 292 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 Cntd1Q9D995 334 aa15.82■□□□□ 0.12
Trim28-201ENSMUST00000005705 E2f3O35261 457 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Cd19P25918 547 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Pabpc1P29341 636 aaKnown RBP15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Serpina3cP29621 417 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Serpind1P49182 478 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rbm15Q0VBL3 962 aaKnown RBP15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Gm7030Q0WXH6 285 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Txndc15Q6P6J9 344 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Pxylp1Q8BHA9 480 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 HadhaQ8BMS1 763 aaKnown RBP15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Fam20bQ8VCS3 409 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Uts2rQ8VIH9 385 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Chchd6Q91VN4 273 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Cnbd2Q9D5U8 673 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Oser1Q9D722 291 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Snap29Q9ERB0 260 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Zbtb18Q9WUK6 522 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ehd1Q9WVK4 534 aaKnown RBP15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Map1bP14873 2464 aaKnown RBP15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Btbd35f21A0A140T8Q5 498 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Btbd35f22J3QN64 498 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Cyp21P03940 487 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Zfp28P10078 825 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 TfamP40630 243 aa15.81■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms