RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ANKRD42Q8N9B4 389 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 LINC01555Q8NAE3 123 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 OR10G6Q8NH81 332 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 IFI44Q8TCB0 444 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 NETO1Q8TDF5 533 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 UBTD2Q8WUN7 234 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 JPH3Q8WXH2 748 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-213ENST00000642137 CCDC74AQ96AQ1 378 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 SLC22A18Q96BI1 424 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 PHF21BQ96EK2 531 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 MIPEPQ99797 713 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 SELENOSQ9BQE4 189 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 SGPP1Q9BX95 441 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 C1QTNF3Q9BXJ4 246 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 PCBD2Q9H0N5 130 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 SLC32A1Q9H598 525 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 INTS7Q9NVH2 962 aaKnown RBP11.92□□□□□ -0.5
LINC00339-213ENST00000642137 HRASLS2Q9NWW9 162 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 WWOXQ9NZC7 414 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 EPHA6Q9UF33 1036 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 PCDHB11Q9Y5F2 797 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 GOLGA4Q13439 2230 aaKnown RBP11.92□□□□□ -0.5
LINC00339-213ENST00000642137 A0A1W2PPV9 198 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 PIPSLA2A3N6 862 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 OR6C74A6NCV1 312 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 H3BQF6 201 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 MATN2O00339 956 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 CHRM5P08912 532 aaPredicted RBP11.91□□□□□ -0.5
LINC00339-213ENST00000642137 NR1D1P20393 614 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 OAS2P29728 719 aaKnown RBP11.91□□□□□ -0.5
LINC00339-213ENST00000642137 ALDH3A1P30838 453 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 SERPINB4P48594 390 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 HSPA7P48741 367 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 WDR4P57081 412 aaKnown RBP11.91□□□□□ -0.5
LINC00339-213ENST00000642137 PRKAA1Q13131 559 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 PCLAFQ15004 111 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 CLPPQ16740 277 aaPredicted RBP11.91□□□□□ -0.5
LINC00339-213ENST00000642137 ZNF678Q5SXM1 525 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 LIPMQ5VYY2 423 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 ARMC6Q6NXE6 501 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 LCTLQ6UWM7 567 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 SPRED1Q7Z699 444 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 GLRX5Q86SX6 157 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 NUDCD3Q8IVD9 361 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 C10orf107Q8IVU9 208 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 KIAA2013Q8IYS2 634 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 PTGR2Q8N8N7 351 aaPredicted RBP11.91□□□□□ -0.5
LINC00339-213ENST00000642137 PPFIBP2Q8ND30 876 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 SREK1Q8WXA9 508 aaKnown RBP11.91□□□□□ -0.5
LINC00339-213ENST00000642137 L3HYPDHQ96EM0 354 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 AHCYL2Q96HN2 611 aaKnown RBP11.91□□□□□ -0.5
LINC00339-213ENST00000642137 NRTNQ99748 197 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 CCDC3Q9BQI4 270 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 TMEM79Q9BSE2 394 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 CAPS2Q9BXY5 557 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 LRRN3Q9H3W5 708 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 CCDC177Q9NQR7 707 aaPredicted RBP11.91□□□□□ -0.5
LINC00339-213ENST00000642137 OGFRQ9NZT2 677 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 SLC22A14Q9Y267 594 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 DMDP11532 3685 aa11.91□□□□□ -0.5
LINC00339-213ENST00000642137 C2orf74A8MZ97 194 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 ISM1B1AKI9 464 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 K7EPI3 171 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 TM4SF5O14894 197 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 FKBP9O95302 570 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 CHN1P15882 459 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 NPPBP16860 134 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 TYRP1P17643 537 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 POLR2CP19387 275 aaPredicted RBP11.9□□□□□ -0.5
LINC00339-213ENST00000642137 CSRP1P21291 193 aaKnown RBP11.9□□□□□ -0.5
LINC00339-213ENST00000642137 KCNA4P22459 653 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 CD1CP29017 333 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 GDF5P43026 501 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 AGTR2P50052 363 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 RP1P56715 2156 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 HERVK_113P63132 956 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 CCL7P80098 99 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 E2F1Q01094 437 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 PRDX1Q06830 199 aaKnown RBP11.9□□□□□ -0.5
LINC00339-213ENST00000642137 ILKQ13418 452 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 C18orf21Q32NC0 220 aaPredicted RBP11.9□□□□□ -0.5
LINC00339-213ENST00000642137 UNC50Q53HI1 259 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 WDR74Q6RFH5 385 aaPredicted RBP11.9□□□□□ -0.5
LINC00339-213ENST00000642137 SUSD1Q6UWL2 747 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 LRRC70Q7Z2Q7 622 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 THOC6Q86W42 341 aaKnown RBP11.9□□□□□ -0.5
LINC00339-213ENST00000642137 C2orf73Q8N5S3 287 aaPredicted RBP11.9□□□□□ -0.5
LINC00339-213ENST00000642137 Q8N9G6 341 aaPredicted RBP11.9□□□□□ -0.5
LINC00339-213ENST00000642137 LMNTD1Q8N9Z9 388 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 OR2A1Q8NGT9 310 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 WDR48Q8TAF3 677 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 MDM1Q8TC05 714 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 NCSTNQ92542 709 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 ESAMQ96AP7 390 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 PYCR2Q96C36 320 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 DPYSL5Q9BPU6 564 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 PAIP2Q9BPZ3 127 aaKnown RBP11.9□□□□□ -0.5
LINC00339-213ENST00000642137 HAUS8Q9BT25 410 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 ERVK-6Q9BXR3 956 aa11.9□□□□□ -0.5
LINC00339-213ENST00000642137 DNAJC11Q9NVH1 559 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms