RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 DNAJC15Q9Y5T4 150 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 NUMA1Q14980 2115 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 FLNBO75369 2602 aaKnown RBP12.73□□□□□ -0.37
PHGDH-221ENST00000641573 LNP1A1A4G5 178 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 PRSS38A1L453 326 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 E9PBE3 544 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 TOR1BO14657 336 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 PIP5K1BO14986 540 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 KLHL41O60662 606 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 KATNA1O75449 491 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 NCF2P19878 526 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-221ENST00000641573 ITPKAP23677 461 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 HTR1BP28222 390 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 NUDT1P36639 197 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 CDC16Q13042 620 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 TRAF3Q13114 568 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 UBAP2LQ14157 1087 aaKnown RBP12.73□□□□□ -0.37
PHGDH-221ENST00000641573 KRT72Q14CN4 511 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 METTL21CQ5VZV1 264 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 LETMD1Q6P1Q0 360 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 AGTRAPQ6RW13 159 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 KLHDC8AQ8IYD2 350 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 CAMKK1Q8N5S9 505 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 CDYL2Q8N8U2 506 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 DCBLD1Q8N8Z6 715 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 TMEM145Q8NBT3 493 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 SPDYE1Q8NFV5 336 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-221ENST00000641573 OR4F6Q8NGB9 312 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 OR9A1PQ8NGU1 263 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 ACTRT2Q8TDY3 377 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 PYCR2Q96C36 320 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 C19orf60Q96EN9 201 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 OR2M4Q96R27 311 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 CCDC106Q9BWC9 280 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 CARS2Q9HA77 564 aaKnown RBP12.73□□□□□ -0.37
PHGDH-221ENST00000641573 DNAJC11Q9NVH1 559 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 ARMCX1Q9P291 453 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 TRIM33Q9UPN9 1127 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 KCNK6Q9Y257 313 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 ASF1AQ9Y294 204 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 NEUROG3Q9Y4Z2 214 aa12.73□□□□□ -0.37
PHGDH-221ENST00000641573 DMXL2Q8TDJ6 3036 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 EML5Q05BV3 1969 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 PRR19A6NJB7 356 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 ANKRD65E5RJM6 399 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 MYO1CO00159 1063 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 IFRD1O00458 451 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-221ENST00000641573 TNFRSF10CO14798 259 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 KHNYNO15037 678 aaKnown RBP12.72□□□□□ -0.37
PHGDH-221ENST00000641573 SCAMP1O15126 338 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 CHEK2O96017 543 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 ENO1P06733 434 aaKnown RBP12.72□□□□□ -0.37
PHGDH-221ENST00000641573 CAPN1P07384 714 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 SLC35G4P0C7Q5 338 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 EPORP19235 508 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 IDSP22304 550 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 IMPA1P29218 277 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 RABIFP47224 123 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 SCTRP47872 440 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 CLCNKAP51800 687 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 THOP1P52888 689 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 NAE1Q13564 534 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 CAPRIN2Q6IMN6 1127 aaKnown RBP12.72□□□□□ -0.37
PHGDH-221ENST00000641573 Q6ZSR6 202 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 ABI3BPQ7Z7G0 1075 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 THOC6Q86W42 341 aaKnown RBP12.72□□□□□ -0.37
PHGDH-221ENST00000641573 DDIASQ8IXT1 998 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-221ENST00000641573 PHC3Q8NDX5 983 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 OR56A3Q8NH54 315 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 CEP70Q8NHQ1 597 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 METTL6Q8TCB7 284 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 MAGEC3Q8TD91 643 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 TFGQ92734 400 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-221ENST00000641573 TUBB6Q9BUF5 446 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 NTMT1Q9BV86 223 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 OSGEPL1Q9H4B0 414 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 TUBB1Q9H4B7 451 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 ACTR5Q9H9F9 607 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-221ENST00000641573 TXLNGQ9NUQ3 528 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 ARL8BQ9NVJ2 186 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 KLQ9UEF7 1012 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 G3BP2Q9UN86 482 aaKnown RBP12.72□□□□□ -0.37
PHGDH-221ENST00000641573 SLC12A4Q9UP95 1085 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 SLC22A14Q9Y267 594 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 BTRCQ9Y297 605 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-221ENST00000641573 PTGDR2Q9Y5Y4 395 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 ST14Q9Y5Y6 855 aa12.72□□□□□ -0.37
PHGDH-221ENST00000641573 DOCK9Q9BZ29 2069 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 CAPN14A8MX76 684 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 HYAL3O43820 417 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-221ENST00000641573 NDUFS2O75306 463 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 ATP5HO75947 161 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 CBX6O95503 412 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 SLC16A8O95907 504 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 RPN2P04844 631 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 LINC00032P0C843 101 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 EBLN1P0CF75 366 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 T-ENOLP0DO92 83 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms