RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 GPR87Q9BY21 358 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 UTP6Q9NYH9 597 aaKnown RBP13.75□□□□□ -0.21
SDHD-209ENST00000640554 TXNDC16Q9P2K2 825 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 PLCL2Q9UPR0 1127 aa13.75□□□□□ -0.21
SDHD-209ENST00000640554 ZNF891A8MT65 544 aaPredicted RBP13.74□□□□□ -0.21
SDHD-209ENST00000640554 TMEM150CB9EJG8 249 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 E7EQ34 232 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 ERVH48-1M5A8F1 160 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 TK2O00142 265 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 CCNDBP1O95273 360 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 CYP2A7P20853 494 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 MCM3P25205 808 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 PEBP1P30086 187 aaKnown RBP13.74□□□□□ -0.21
SDHD-209ENST00000640554 BDKRB1P46663 353 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 FASTKD3Q14CZ7 662 aaKnown RBP13.74□□□□□ -0.21
SDHD-209ENST00000640554 HECTD2Q5U5R9 776 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 TLDC1Q6P9B6 456 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 PAQR3Q6TCH7 311 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 CDHR3Q6ZTQ4 885 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 STRA8Q7Z7C7 330 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 VASH2Q86V25 355 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 CPNE9Q8IYJ1 553 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 DNAJC22Q8N4W6 341 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 CEP112Q8N8E3 955 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 GALNT6Q8NCL4 622 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 CCDC138Q96M89 665 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 CATSPER2Q96P56 530 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 IL17FQ96PD4 163 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 NDNQ99608 321 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 NRTNQ99748 197 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 C17orf62Q9BQA9 187 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 LRRC1Q9BTT6 524 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 SLC12A9Q9BXP2 914 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 TRIM54Q9BYV2 358 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 PARVBQ9HBI1 364 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 LHX9Q9NQ69 397 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 ANKMY1Q9P2S6 941 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 PCDHGA6Q9Y5G7 932 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 PCDHGA4Q9Y5G9 962 aa13.74□□□□□ -0.21
SDHD-209ENST00000640554 LOC101059948A0A1B0GTJ6 334 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 PABPN1LA6NDY0 278 aaKnown RBP13.73□□□□□ -0.21
SDHD-209ENST00000640554 SRPX2O60687 465 aaPredicted RBP13.73□□□□□ -0.21
SDHD-209ENST00000640554 CD63P08962 238 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 HIST1H2AGP0C0S8 130 aaPredicted RBP13.73□□□□□ -0.21
SDHD-209ENST00000640554 LIFP15018 202 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 PVRP15151 417 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 ZNF28P17035 718 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 HIST1H2ADP20671 130 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 FDXRP22570 491 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 CMPK1P30085 196 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 RPA3P35244 121 aaPredicted RBP13.73□□□□□ -0.21
SDHD-209ENST00000640554 MAGEA4P43358 317 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 PNLIPRP1P54315 467 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 CDKN2DP55273 166 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 ABATP80404 500 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 TIAL1Q01085 375 aaKnown RBP eCLIP13.73□□□□□ -0.21
SDHD-209ENST00000640554 RELAQ04206 551 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 CUL1Q13616 776 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 CCSMST1Q4G0I0 132 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 TCTE1Q5JU00 501 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 YOD1Q5VVQ6 348 aaPredicted RBP13.73□□□□□ -0.21
SDHD-209ENST00000640554 FIGLAQ6QHK4 219 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 UBE2R2Q712K3 238 aaPredicted RBP13.73□□□□□ -0.21
SDHD-209ENST00000640554 ZC3HC1Q86WB0 502 aaKnown RBP13.73□□□□□ -0.21
SDHD-209ENST00000640554 NKAPQ8N5F7 415 aaKnown RBP13.73□□□□□ -0.21
SDHD-209ENST00000640554 GPATCH11Q8N954 259 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 OR2A1Q8NGT9 310 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 OR1L3Q8NH93 324 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 EEF1AKMT1Q8WVE0 214 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 CRELD1Q96HD1 420 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 HIST1H2AHQ96KK5 128 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 PKP4Q99569 1192 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 CPNE1Q99829 537 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 HIST1H2AJQ99878 128 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 H2AFJQ9BTM1 129 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 SLC7A5P2Q9GIP4 190 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 PCBD2Q9H0N5 130 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 RHOJQ9H4E5 214 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 ACTR5Q9H9F9 607 aaPredicted RBP13.73□□□□□ -0.21
SDHD-209ENST00000640554 POPDC3Q9HBV1 291 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 ENAMQ9NRM1 1142 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 MTRF1LQ9UGC7 380 aaKnown RBP13.73□□□□□ -0.21
SDHD-209ENST00000640554 SRPK3Q9UPE1 567 aa13.73□□□□□ -0.21
SDHD-209ENST00000640554 RUVBL2Q9Y230 463 aaKnown RBP13.73□□□□□ -0.21
SDHD-209ENST00000640554 ADAMTS20P59510 1910 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 MEN1O00255 615 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 OR2B3O76000 313 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 TIAF1O95411 115 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 SLC16A8O95907 504 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 NTRK1P04629 796 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 ENO2P09104 434 aaPredicted RBP13.72□□□□□ -0.21
SDHD-209ENST00000640554 TCN2P20062 427 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 MAGP20916 626 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 CCND1P24385 295 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 HRH2P25021 359 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 SSTR1P30872 391 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 STX2P32856 288 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 DLSTP36957 453 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 GABRA4P48169 554 aa13.72□□□□□ -0.21
SDHD-209ENST00000640554 SLC12A2P55011 1212 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms