RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 DHX9Q08211 1270 aaKnown RBP17.04■□□□□ 0.32
PTPN11-207ENST00000639857 ERV3-1Q14264 604 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 KLHL38Q2WGJ6 581 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 DEFB109BQ30KR1 87 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 HSP90AA5PQ58FG0 334 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 ACSBG2Q5FVE4 666 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 ZC3H12BQ5HYM0 836 aaKnown RBP17.04■□□□□ 0.32
PTPN11-207ENST00000639857 ZNF385CQ66K41 422 aaPredicted RBP17.04■□□□□ 0.32
PTPN11-207ENST00000639857 C2CD4AQ8NCU7 369 aaPredicted RBP17.04■□□□□ 0.32
PTPN11-207ENST00000639857 ZUFSPQ96AP4 578 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 SNF8Q96H20 258 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 IL17FQ96PD4 163 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 DHRS4Q9BTZ2 278 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 CHST8Q9H2A9 424 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 AKIRIN1Q9H9L7 192 aaPredicted RBP17.04■□□□□ 0.32
PTPN11-207ENST00000639857 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.04■□□□□ 0.32
PTPN11-207ENST00000639857 RUVBL2Q9Y230 463 aaKnown RBP17.04■□□□□ 0.32
PTPN11-207ENST00000639857 FARSAQ9Y285 508 aaKnown RBP17.04■□□□□ 0.32
PTPN11-207ENST00000639857 MED16Q9Y2X0 877 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 DHRS7Q9Y394 339 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 KCNMB2Q9Y691 235 aa17.04■□□□□ 0.32
PTPN11-207ENST00000639857 ZNF839A8K0R7 811 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 ARHGEF33A8MVX0 844 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 C9J4A7 227 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 VPS26AO75436 327 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 CD63P08962 238 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 SF1Q15637 639 aaKnown RBP17.03■□□□□ 0.32
PTPN11-207ENST00000639857 HIF1AQ16665 826 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 PRAMEF17Q5VTA0 474 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 YOD1Q5VVQ6 348 aaPredicted RBP17.03■□□□□ 0.32
PTPN11-207ENST00000639857 UGT3A1Q6NUS8 523 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 HIBCHQ6NVY1 386 aaPredicted RBP17.03■□□□□ 0.32
PTPN11-207ENST00000639857 ZNF549Q6P9A3 640 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 FAM199XQ6PEV8 388 aaPredicted RBP17.03■□□□□ 0.32
PTPN11-207ENST00000639857 FAM198BQ6UWH4 519 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 APLFQ8IW19 511 aaPredicted RBP17.03■□□□□ 0.32
PTPN11-207ENST00000639857 OR9A1PQ8NGU1 263 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 INPP5DQ92835 1189 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 FAM136AQ96C01 138 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 AARSD1Q9BTE6 412 aaKnown RBP17.03■□□□□ 0.32
PTPN11-207ENST00000639857 EURLQ9NYK6 297 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 GALPQ9UBC7 116 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 PADI2Q9Y2J8 665 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 ANKRD12Q6UB98 2062 aa17.03■□□□□ 0.32
PTPN11-207ENST00000639857 BAHCC1Q9P281 2608 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 ZNF462Q96JM2 2506 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 CDC14CA4D256 554 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 SEC31AO94979 1220 aaKnown RBP17.02■□□□□ 0.32
PTPN11-207ENST00000639857 SKIV2L2P42285 1042 aaKnown RBP17.02■□□□□ 0.32
PTPN11-207ENST00000639857 PMS2P54278 862 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 MPP1Q00013 466 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 NFATC3Q12968 1075 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 CBLBQ13191 982 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 FRG1Q14331 258 aaKnown RBP17.02■□□□□ 0.32
PTPN11-207ENST00000639857 NCF4Q15080 339 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 DEFB110Q30KQ9 67 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 CCSMST1Q4G0I0 132 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 MSS51Q4VC12 460 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.02■□□□□ 0.32
PTPN11-207ENST00000639857 TCTE1Q5JU00 501 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 ATP1A1-AS1Q5TC04 95 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 TAX1BP1Q86VP1 789 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 BBOF1Q8ND07 529 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 OR2L3Q8NG85 312 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 GIMAP7Q8NHV1 300 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 CD200R1Q8TD46 325 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 SMPDL3AQ92484 453 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 DLG3Q92796 817 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 CERS2Q96G23 380 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 GPR21Q99679 349 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 IARS2Q9NSE4 1012 aaKnown RBP17.02■□□□□ 0.32
PTPN11-207ENST00000639857 ANKMY1Q9P2S6 941 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 CIDEBQ9UHD4 219 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 CORO1CQ9ULV4 474 aaPredicted RBP17.02■□□□□ 0.32
PTPN11-207ENST00000639857 MAN2B2Q9Y2E5 1009 aa17.02■□□□□ 0.32
PTPN11-207ENST00000639857 NUP210LQ5VU65 1888 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 A0A1W2PPV9 198 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 GFYI3L273 518 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 FANCGO15287 622 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 TTI1O43156 1089 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 HCRTR1O43613 425 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 HAUS5O94927 633 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 CAPN1P07384 714 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 FURINP09958 794 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 PLA2G2AP14555 144 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 GCGRP47871 477 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 ARSFP54793 590 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 ARL4CP56559 192 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 BBS9Q3SYG4 887 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 STEAP4Q687X5 459 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 FIGLAQ6QHK4 219 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 MCATQ8IVS2 390 aaKnown RBP17.01■□□□□ 0.31
PTPN11-207ENST00000639857 ENDOVQ8N8Q3 282 aaKnown RBP17.01■□□□□ 0.31
PTPN11-207ENST00000639857 OR2A1Q8NGT9 310 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 C9orf43Q8TAL5 461 aaPredicted RBP17.01■□□□□ 0.31
PTPN11-207ENST00000639857 ASB11Q8WXH4 323 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 ZNF285Q96NJ3 590 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 GBP5Q96PP8 586 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 RUFY1Q96T51 708 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 SLC30A3Q99726 388 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms