RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 RPF2Q9H7B2 306 aaKnown RBP14.69□□□□□ -0.06
TRIM3-215ENST00000639856 FAM8A1Q9UBU6 413 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 ZNHIT2Q9UHR6 403 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 ANAPC2Q9UJX6 822 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 USP22Q9UPT9 525 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 PCDHB3Q9Y5E6 796 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 CROCCQ5TZA2 2017 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 FAM149AA5PLN7 773 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 SAC3D1A6NKF1 404 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 K7ESM1 405 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 KPNA5O15131 536 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 MMP20O60882 483 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 KCNH1O95259 989 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 HRH2P25021 359 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 CCT8P50990 548 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 OR4D2P58180 307 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 NHSL2Q5HYW2 709 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 EPHX4Q8IUS5 362 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 LIX1Q8N485 282 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 BTN2A2Q8WVV5 523 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 DTD2Q96FN9 168 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 PRPF18Q99633 342 aaKnown RBP14.69□□□□□ -0.06
TRIM3-215ENST00000639856 MRPS26Q9BYN8 205 aaKnown RBP14.69□□□□□ -0.06
TRIM3-215ENST00000639856 DPY30Q9C005 99 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 EPB41L1Q9H4G0 881 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 PIF1Q9H611 641 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 C1orf109Q9NX04 203 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 MAGEL2Q9UJ55 1249 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 NEUROG3Q9Y4Z2 214 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 PRUNE2Q8WUY3 3088 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 ARHGAP10A1A4S6 786 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 TMEM202A6NGA9 273 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 CFAP99D6REC4 459 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 GFYI3L273 518 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 RECQL5O94762 991 aaPredicted RBP14.68□□□□□ -0.06
TRIM3-215ENST00000639856 SOD1P00441 154 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 APODP05090 189 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 TFAP2AP05549 437 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 C6P13671 934 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 SOX11P35716 441 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 EIF2DP41214 584 aaKnown RBP14.68□□□□□ -0.06
TRIM3-215ENST00000639856 RPL5P46777 297 aaKnown RBP14.68□□□□□ -0.06
TRIM3-215ENST00000639856 SEC13P55735 322 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 MTPNP58546 118 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 SP140Q13342 867 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 SELPLGQ14242 412 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 CPSF6Q16630 551 aaKnown RBP eCLIP14.68□□□□□ -0.06
TRIM3-215ENST00000639856 FAM174BQ3ZCQ3 159 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 GGTA1PQ4G0N0 100 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 SATL1Q86VE3 508 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 RALGPS2Q86X27 583 aaPredicted RBP14.68□□□□□ -0.06
TRIM3-215ENST00000639856 TBC1D21Q8IYX1 336 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 CBR4Q8N4T8 237 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 MFSD2AQ8NA29 543 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 OR8J3Q8NGG0 315 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 EZH1Q92800 747 aaPredicted RBP14.68□□□□□ -0.06
TRIM3-215ENST00000639856 GLYATL1Q969I3 302 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 PPP1R16AQ96I34 528 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 C9orf16Q9BUW7 83 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 RAD18Q9NS91 495 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 NDUFA13Q9P0J0 144 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 STON1Q9Y6Q2 735 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 CKAP5Q14008 2032 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 SMIM31A0A1B0GVY4 71 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 EME2A4GXA9 379 aaPredicted RBP14.68□□□□□ -0.06
TRIM3-215ENST00000639856 PABPN1LA6NDY0 278 aaKnown RBP14.68□□□□□ -0.06
TRIM3-215ENST00000639856 H0Y858 1186 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 PSMD11O00231 422 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 SLC16A5O15375 505 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 AHCYL1O43865 530 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 IL6P05231 212 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 BMP8BP34820 402 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 P2RY2P41231 377 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 SLC6A12P48065 614 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 CTSCP53634 463 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 CNTN1Q12860 1018 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 MAPKAPK3Q16644 382 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 PTCHD3Q3KNS1 767 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 USP39Q53GS9 565 aaKnown RBP14.68□□□□□ -0.06
TRIM3-215ENST00000639856 GLYATQ6IB77 296 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 SUSD1Q6UWL2 747 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 ERN2Q76MJ5 926 aaKnown RBP14.68□□□□□ -0.06
TRIM3-215ENST00000639856 TRIM74Q86UV6 250 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 CHPFQ8IZ52 775 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 RASGEF1AQ8N9B8 481 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 GTF2H4Q92759 462 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 BIRC7Q96CA5 298 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 MTFMTQ96DP5 389 aaKnown RBP14.68□□□□□ -0.06
TRIM3-215ENST00000639856 ANKRD60Q9BZ19 345 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 ACPTQ9BZG2 426 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 CLMPQ9H6B4 373 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 DYRK4Q9NR20 520 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 VAPAQ9P0L0 249 aa14.68□□□□□ -0.06
TRIM3-215ENST00000639856 KRT87PA6NCN2 255 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 ENO4A6NNW6 628 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 PDYNP01213 254 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 PGRP06401 933 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 CYP2A7P20853 494 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 GALK1P51570 392 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 PLIN5Q00G26 463 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms