RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ADRA1DP25100 572 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 NDUFS1P28331 727 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 PTPN4P29074 926 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 FDFT1P37268 417 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 NSG1P42857 185 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 MAGEA4P43358 317 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 CSE1LP55060 971 aaKnown RBP7.57□□□□□ -1.2
PNKP-229ENST00000637897 ITGA1P56199 1179 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 ARL4CP56559 192 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 SNRPNP63162 240 aaKnown RBP7.57□□□□□ -1.2
PNKP-229ENST00000637897 ACY1Q03154 408 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 CBLBQ13191 982 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 GBX1Q14549 363 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 HIF1AQ16665 826 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 DEFB110Q30KQ9 67 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 PTCHD3Q3KNS1 767 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 CTSL3PQ5NE16 218 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 CLEC18BQ6UXF7 455 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 TAOK1Q7L7X3 1001 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 CAND1Q86VP6 1230 aaKnown RBP7.57□□□□□ -1.2
PNKP-229ENST00000637897 AMIGO1Q86WK6 493 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 SLC22A15Q8IZD6 547 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 SHISA5Q8N114 240 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 RIBC1Q8N443 379 aaPredicted RBP7.57□□□□□ -1.2
PNKP-229ENST00000637897 DNAJC22Q8N4W6 341 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 ZBTB2Q8N680 514 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 AMER2Q8N7J2 671 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 CLEC18CQ8NCF0 446 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 DENND1AQ8TEH3 1009 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 HEXDCQ8WVB3 486 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 APOBEC4Q8WW27 367 aaKnown RBP7.57□□□□□ -1.2
PNKP-229ENST00000637897 LCN9Q8WX39 176 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 ELMO1Q92556 727 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 MFSD3Q96ES6 412 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 STAMBPL1Q96FJ0 436 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 LRFN5Q96NI6 719 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 BIRC8Q96P09 236 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 MESP1Q9BRJ9 268 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 SPRTNQ9H040 489 aaPredicted RBP7.57□□□□□ -1.2
PNKP-229ENST00000637897 SRMSQ9H3Y6 488 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 MVB12BQ9H7P6 319 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 PDE7BQ9NP56 450 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 SAYSD1Q9NPB0 183 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 SYBUQ9NX95 663 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 NINJ2Q9NZG7 142 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 NOVA2Q9UNW9 492 aaKnown RBP7.57□□□□□ -1.2
PNKP-229ENST00000637897 RUVBL2Q9Y230 463 aaKnown RBP7.57□□□□□ -1.2
PNKP-229ENST00000637897 MED16Q9Y2X0 877 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 PCDHB3Q9Y5E6 796 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 COLEC10Q9Y6Z7 277 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 LRRK2Q5S007 2527 aa7.57□□□□□ -1.2
PNKP-229ENST00000637897 A0A1W2PPV9 198 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 TLDC2A0PJX2 215 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 HEATR9A2RTY3 570 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 GSAPA4D1B5 854 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 ERI2A8K979 691 aaKnown RBP7.56□□□□□ -1.2
PNKP-229ENST00000637897 C21orf140B9A014 251 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 TMEM150CB9EJG8 249 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 CFAP99D6REC4 459 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 GOLGA8TH3BQL2 631 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 LIN7AO14910 233 aaPredicted RBP7.56□□□□□ -1.2
PNKP-229ENST00000637897 PSMD3O43242 534 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 ZNF749O43361 778 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 AVILO75366 819 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 TMEM63AO94886 807 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 SLCO2B1O94956 709 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 RECKO95980 971 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 APRTP07741 180 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 CHRM5P08912 532 aaPredicted RBP7.56□□□□□ -1.2
PNKP-229ENST00000637897 CBSLP0DN79 551 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 RALBP11234 206 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 CDH3P22223 829 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 MGAT1P26572 445 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 AOAHP28039 575 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 PKLRP30613 574 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 PHBP35232 272 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 CBSP35520 551 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 CASRP41180 1078 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 MAGEA6P43360 314 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 CSRP3P50461 194 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 SESN2P58004 480 aaPredicted RBP7.56□□□□□ -1.2
PNKP-229ENST00000637897 MAGOHP61326 146 aaKnown RBP7.56□□□□□ -1.2
PNKP-229ENST00000637897 PPP2R2AP63151 447 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 FOXK1P85037 733 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 KCNJ11Q14654 390 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 KYNUQ16719 465 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 UGT8Q16880 541 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 FCRL6Q6DN72 434 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 KLHL35Q6PF15 583 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 AFTPHQ6ULP2 937 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 SPESP1Q6UW49 350 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 ATG14Q6ZNE5 492 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 LINC00523Q86TU6 105 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 BPHLQ86WA6 291 aaPredicted RBP7.56□□□□□ -1.2
PNKP-229ENST00000637897 APLFQ8IW19 511 aaPredicted RBP7.56□□□□□ -1.2
PNKP-229ENST00000637897 HOMEZQ8IX15 550 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 TBC1D21Q8IYX1 336 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 PDIK1LQ8N165 341 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 CARFQ8N187 725 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 C2orf73Q8N5S3 287 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms