RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 EBNA1BP2Q99848 306 aaKnown RBP13.29□□□□□ -0.28
PNKP-228ENST00000637325 DPH2Q9BQC3 489 aaPredicted RBP13.29□□□□□ -0.28
PNKP-228ENST00000637325 NAT9Q9BTE0 207 aa13.29□□□□□ -0.28
PNKP-228ENST00000637325 NLNQ9BYT8 704 aa13.29□□□□□ -0.28
PNKP-228ENST00000637325 FAM114A2Q9NRY5 505 aa13.29□□□□□ -0.28
PNKP-228ENST00000637325 TXLNGQ9NUQ3 528 aa13.29□□□□□ -0.28
PNKP-228ENST00000637325 SPATA7Q9P0W8 599 aa13.29□□□□□ -0.28
PNKP-228ENST00000637325 GALPQ9UBC7 116 aa13.29□□□□□ -0.28
PNKP-228ENST00000637325 GPN3Q9UHW5 284 aaPredicted RBP13.29□□□□□ -0.28
PNKP-228ENST00000637325 SNX7Q9UNH6 387 aa13.29□□□□□ -0.28
PNKP-228ENST00000637325 KCNMB2Q9Y691 235 aa13.29□□□□□ -0.28
PNKP-228ENST00000637325 COMMD10Q9Y6G5 202 aa13.29□□□□□ -0.28
PNKP-228ENST00000637325 CCDC188H7C350 402 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 ZSCAN9O15535 394 aaPredicted RBP13.28□□□□□ -0.28
PNKP-228ENST00000637325 FKBP9O95302 570 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 MATN4O95460 622 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 CATP04040 527 aaKnown RBP13.28□□□□□ -0.28
PNKP-228ENST00000637325 CLCN7P51798 805 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 NFKB2Q00653 900 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 CUL1Q13616 776 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 TSTA3Q13630 321 aaPredicted RBP13.28□□□□□ -0.28
PNKP-228ENST00000637325 GBX1Q14549 363 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 CRYMQ14894 314 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 MORF4L2Q15014 288 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 UGT8Q16880 541 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 ZC3H12BQ5HYM0 836 aaKnown RBP13.28□□□□□ -0.28
PNKP-228ENST00000637325 SPANXN3Q5MJ09 141 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 C1orf189Q5VU69 101 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 FIGLAQ6QHK4 219 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 ZNF517Q6ZMY9 492 aaPredicted RBP13.28□□□□□ -0.28
PNKP-228ENST00000637325 NEK10Q6ZWH5 1172 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 MCATQ8IVS2 390 aaKnown RBP13.28□□□□□ -0.28
PNKP-228ENST00000637325 PDIK1LQ8N165 341 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 OR9A1PQ8NGU1 263 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 THAP4Q8WY91 577 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 INPP5DQ92835 1189 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 ZUFSPQ96AP4 578 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 MIPEPQ99797 713 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 C17orf62Q9BQA9 187 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 NDC1Q9BTX1 674 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 ZNF71Q9NQZ8 489 aaPredicted RBP13.28□□□□□ -0.28
PNKP-228ENST00000637325 EURLQ9NYK6 297 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 KLHL42Q9P2K6 505 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 RNF14Q9UBS8 474 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 SRPK3Q9UPE1 567 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 PADI2Q9Y2J8 665 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 BSNQ9UPA5 3926 aa13.28□□□□□ -0.28
PNKP-228ENST00000637325 KRT87PA6NCN2 255 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 ZNF839A8K0R7 811 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 ARHGEF33A8MVX0 844 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 MKRN2OSH3BPM6 223 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 SMAPO00193 183 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 HCRTR1O43613 425 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 VPS26AO75436 327 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 BANF1O75531 89 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 RFPL1O75677 317 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 HAUS5O94927 633 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 SYF2O95926 243 aaKnown RBP13.27□□□□□ -0.29
PNKP-228ENST00000637325 CBSLP0DN79 551 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 ERVK-10P10266 1014 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 ALAS2P22557 587 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 CBSP35520 551 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 GRIA3P42263 894 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 GABRA4P48169 554 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 HP1BP3Q5SSJ5 553 aaPredicted RBP13.27□□□□□ -0.29
PNKP-228ENST00000637325 MLIPQ5VWP3 458 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 UGT3A1Q6NUS8 523 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 ZNF549Q6P9A3 640 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 PTRH1Q86Y79 214 aaKnown RBP13.27□□□□□ -0.29
PNKP-228ENST00000637325 HMGCLL1Q8TB92 370 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 PROKR1Q8TCW9 393 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 DENND1AQ8TEH3 1009 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 DLG3Q92796 817 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 KCNJ9Q92806 393 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 CFAP36Q96G28 342 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 ABHD17AQ96GS6 310 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 GPR21Q99679 349 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 SLC30A3Q99726 388 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 TRIM31Q9BZY9 425 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 PPANQ9NQ55 473 aaKnown RBP13.27□□□□□ -0.29
PNKP-228ENST00000637325 NDOR1Q9UHB4 597 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 TCFL5Q9UL49 500 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 DHRS7Q9Y394 339 aa13.27□□□□□ -0.29
PNKP-228ENST00000637325 NBASA2RRP1 2371 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 TARM1B6A8C7 271 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 J3QKU1 62 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 TTI1O43156 1089 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 PRICKLE3O43900 615 aaPredicted RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 PSIP1O75475 530 aaKnown RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 CTSBP07858 339 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 CD63P08962 238 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 MPC1LP0DKB6 136 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 ENO3P13929 434 aaPredicted RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 PSMB5P28074 263 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 CMPK1P30085 196 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 RPA3P35244 121 aaPredicted RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 HSD17B2P37059 387 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 CARSP49589 748 aaKnown RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 ITGA8P53708 1063 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 PMS2P54278 862 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms