RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 GATAD2AQ86YP4 633 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 VRK3Q8IV63 474 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 DSELQ8IZU8 1212 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 CDC26Q8NHZ8 85 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 CHPT1Q8WUD6 406 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 ATP6V1E2Q96A05 226 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 ASB2Q96Q27 587 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 FAM126AQ9BYI3 521 aaPredicted RBP11.24□□□□□ -0.61
CLN6-217ENST00000636964 SLC27A6Q9Y2P4 619 aa11.24□□□□□ -0.61
CLN6-217ENST00000636964 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.23□□□□□ -0.61
CLN6-217ENST00000636964 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.23□□□□□ -0.61
CLN6-217ENST00000636964 H3BMQ9 156 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 ARHGAP33O14559 1287 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 ELFN1P0C7U0 828 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 WASP42768 502 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 PTPN5P54829 565 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 MLLT10P55197 1068 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 FASTKQ14296 549 aaKnown RBP11.23□□□□□ -0.61
CLN6-217ENST00000636964 ZNF234Q14588 700 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 TXNDC11Q6PKC3 985 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 SPARTQ8N0X7 666 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 RP9Q8TA86 221 aaKnown RBP11.23□□□□□ -0.61
CLN6-217ENST00000636964 WFIKKN2Q8TEU8 576 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 COG8Q96MW5 612 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 RPP25Q9BUL9 199 aaKnown RBP11.23□□□□□ -0.61
CLN6-217ENST00000636964 SERHL2Q9H4I8 314 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 TCF20Q9UGU0 1960 aaKnown RBP11.23□□□□□ -0.61
CLN6-217ENST00000636964 PLXNB3Q9ULL4 1909 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 GIPC1O14908 333 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 RAD51BO15315 384 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 GNAO1P09471 354 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 ATP1B2P14415 290 aaPredicted RBP11.23□□□□□ -0.61
CLN6-217ENST00000636964 ZNF30P17039 623 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 BMXP51813 675 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 ERVPABLB-1P60509 514 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 HYAL1Q12794 435 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 ZNF829Q3KNS6 432 aaPredicted RBP11.23□□□□□ -0.61
CLN6-217ENST00000636964 C9orf64Q5T6V5 341 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 PPP4R4Q6NUP7 873 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 LIPIQ6XZB0 460 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 CHSY3Q70JA7 882 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 OR56A4Q8NGH8 313 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 C8orf4Q9NR00 106 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 NUDT4Q9NZJ9 180 aa11.23□□□□□ -0.61
CLN6-217ENST00000636964 TAPBPO15533 448 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 OR56A5P0C7T3 313 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 ALAS2P22557 587 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 PIK3CGP48736 1102 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 BNIP3Q12983 259 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 KIF19Q2TAC6 998 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 LETMD1Q6P1Q0 360 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 KYQ8NBH2 561 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 STARD8Q92502 1023 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 ARRDC3Q96B67 414 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 SLCO4A1Q96BD0 722 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 C19orf43Q9BQ61 176 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 THG1LQ9NWX6 298 aaKnown RBP11.22□□□□□ -0.61
CLN6-217ENST00000636964 POLG2Q9UHN1 485 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 RBMX2Q9Y388 322 aaKnown RBP11.22□□□□□ -0.61
CLN6-217ENST00000636964 NUP210Q8TEM1 1887 aaPredicted RBP11.22□□□□□ -0.61
CLN6-217ENST00000636964 ZNF106Q9H2Y7 1883 aaKnown RBP11.22□□□□□ -0.61
CLN6-217ENST00000636964 FAM47E-STBD1D6RA91 191 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 BMP10O95393 424 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 ESRRBO95718 433 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 ENO2P09104 434 aaPredicted RBP11.22□□□□□ -0.61
CLN6-217ENST00000636964 HGFP14210 728 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 HMBOX1Q6NT76 420 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 LAYNQ6UX15 382 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 GPRIN3Q6ZVF9 776 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 GOLGA7Q7Z5G4 137 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 MMAAQ8IVH4 418 aaKnown RBP11.22□□□□□ -0.61
CLN6-217ENST00000636964 BORCS5Q969J3 196 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 CHFRQ96EP1 664 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 MYADMQ96S97 322 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 HAUS8Q9BT25 410 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 TBC1D23Q9NUY8 699 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 CACNA2D2Q9NY47 1150 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 GDE1Q9NZC3 331 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 SPEGQ15772 3267 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 WDR87Q6ZQQ6 2873 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 TMEM202A6NGA9 273 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 MLYCDO95822 493 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 GRIA3P42263 894 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 EIF2B2P49770 351 aaKnown RBP11.22□□□□□ -0.61
CLN6-217ENST00000636964 BPIFB3P59826 476 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 ART3Q13508 389 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 RUNX3Q13761 415 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 GTF2H2Q13888 395 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 HNRNPA1L2Q32P51 320 aaKnown RBP11.22□□□□□ -0.61
CLN6-217ENST00000636964 TTLL9Q3SXZ7 439 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 GTF2H2CQ6P1K8 395 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 CORO6Q6QEF8 472 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 PARM1Q6UWI2 310 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 SLC15A4Q8N697 577 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 TERB1Q8NA31 727 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 LRTOMTQ8WZ04 291 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 AP2M1Q96CW1 435 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 IPPKQ9H8X2 491 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 SACM1LQ9NTJ5 587 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms