RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	CDHR3	Q6ZTQ4	885 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	GALNT5	Q7Z7M9	940 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ARFGAP1	Q8N6T3	406 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ZSCAN5A	Q9BUG6	496 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PCDHAC1	Q9H158	963 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	EPB41L4B	Q9H329	900 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	OXSM	Q9NWU1	459 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	SSC5D	A1L4H1	1573 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	LILRB3	O75022	631 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ZBTB11	O95625	1053 aa	Predicted RBP	13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	NUP107	P57740	925 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	RPS14	P62263	151 aa	Known RBP	13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	MPP2	Q14168	576 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ADGRG2	Q8IZP9	1017 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	TERB1	Q8NA31	727 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	SHKBP1	Q8TBC3	707 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	RORB	Q92753	470 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	SMIM14	Q96QK8	99 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	GPR22	Q99680	433 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PRRG3	Q9BZD7	231 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	TFB2M	Q9H5Q4	396 aa	Known RBP	13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	KLHL1	Q9NR64	748 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ATP6V1H	Q9UI12	483 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PIPSL	A2A3N6	862 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	SERPINB7	O75635	380 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	TGDS	O95455	350 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PGD	P52209	483 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	TMEM115	Q12893	351 aa	Predicted RBP	13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PRKD1	Q15139	912 aa	Predicted RBP	13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ANXA8L1	Q5VT79	327 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	METTL21C	Q5VZV1	264 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PARM1	Q6UWI2	310 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	CHST14	Q8NCH0	376 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	IMP4	Q96G21	291 aa	Known RBP	13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ZNF514	Q96K75	400 aa	Predicted RBP	13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	MIPEP	Q99797	713 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	SLC46A2	Q9BY10	475 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	FZD3	Q9NPG1	666 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	GMPPB	Q9Y5P6	360 aa		13.99	□□□□□ -0.17
NEDD4L-238	ENST00000635997	STX16-NPEPL1	H3BU86	382 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	LAT	O43561	262 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	NAA20	P61599	178 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	NFKB2	Q00653	900 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	EPS8	Q12929	822 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	DSC3	Q14574	896 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	C11orf91	Q3C1V1	193 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	INO80D	Q53TQ3	878 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PRRT3	Q5FWE3	981 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	EIF3M	Q7L2H7	374 aa	Known RBP	13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	TSPAN33	Q86UF1	283 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	TSGA13	Q96PP4	275 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	RTKN	Q9BST9	563 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	FNDC11	Q9BVV2	318 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	KIFC1	Q9BW19	673 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	GSDMC	Q9BYG8	508 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	MYRF	Q9Y2G1	1151 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	SHISA7	A6NL88	538 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	IMPDH1	P20839	514 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ANGPT1	Q15389	498 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	HKDC1	Q2TB90	917 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ATP13A5	Q4VNC0	1218 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	SPATA19	Q7Z5L4	167 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	FBXL6	Q8N531	539 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	JPH3	Q8WXH2	748 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	OR51B5	Q9H339	312 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	RASSF1	Q9NS23	344 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	INTS7	Q9NVH2	962 aa	Known RBP	13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	SMAD6	O43541	496 aa	Known RBP	13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PGLS	O95336	258 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	CCNYL3	P0C7X3	344 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	FNTB	P49356	437 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	HERVK_113	P63132	956 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	UBAP2	Q5T6F2	1119 aa	Known RBP	13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PSAPL1	Q6NUJ1	521 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ZNF554	Q86TJ5	538 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	CYP4Z2P	Q8N1L4	340 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	NXPE1	Q8N323	547 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ERVK-6	Q9BXR3	956 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	MRPS30	Q9NP92	439 aa	Known RBP	13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	CDH22	Q9UJ99	828 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	SEC16A	O15027	2179 aa		13.98	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PNMA8C	A0A1B0GUJ8	204 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997		A8MUA0	341 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	C2CD4D	B7Z1M9	353 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	NPC1	O15118	1278 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	MATN4	O95460	622 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	POU2F1	P14859	743 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	FAM189B	P81408	668 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	SLC13A2	Q13183	592 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	DPYS	Q14117	519 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	TRIM16L	Q309B1	348 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	DNASE1L2	Q92874	299 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	AKTIP	Q9H8T0	292 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	FTSJ1	Q9UET6	329 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	RP1	P56715	2156 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	TMEM221	A6NGB7	291 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997		C9J4A7	227 aa		13.97	□□□□□ -0.17
NEDD4L-238	ENST00000635997	TMEM189-UBE2V1	I3L0A0	370 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms