RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 RNF103O00237 685 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 TRDMT1O14717 391 aaKnown RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 LINC01565O15544 149 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 PSMD3O43242 534 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 TBL1XO60907 577 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 PRAMEF12O95522 483 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 METTL18O95568 372 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 JCHAINP01591 159 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 CYP2A6P11509 494 aaPredicted RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 PTPN3P26045 913 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 HSPA9P38646 679 aaKnown RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 IFNAR2P48551 515 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 NEK3P51956 506 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 IFI35P80217 286 aaPredicted RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 BASP1P80723 227 aaKnown RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 SARNPP82979 210 aaKnown RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 GNA12Q03113 381 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 CCDC15Q0P6D6 951 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 SLC12A1Q13621 1099 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 PMS2P11Q13670 270 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 KCNJ11Q14654 390 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 RFTN1Q14699 578 aaPredicted RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 ZNF77Q15935 545 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 KCTD19Q17RG1 926 aaPredicted RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 SPDYCQ5MJ68 293 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 MARC1Q5VT66 337 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 ITPRIPL1Q6GPH6 555 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 CES5AQ6NT32 575 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 PPP1R21Q6ZMI0 780 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 CCDC117Q8IWD4 279 aaPredicted RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 CCDC28AQ8IWP9 274 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 ZNF567Q8N184 647 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 MREGQ8N565 214 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 ZCCHC9Q8N567 271 aaKnown RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 ZNF557Q8N988 423 aaPredicted RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 TDRD5Q8NAT2 981 aaKnown RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 MCUQ8NE86 351 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 FIBINQ8TAL6 211 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 DDI1Q8WTU0 396 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 NSMCE1Q8WV22 266 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 ING5Q8WYH8 240 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 CPT1BQ92523 772 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 FGF13Q92913 245 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 SMARCD2Q92925 531 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 ARHGEF2Q92974 986 aaKnown RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 EXOC4Q96A65 974 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 GRAMD1AQ96CP6 724 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 HMCESQ96FZ2 354 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 ZNF599Q96NL3 588 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 AGAP3Q96P47 875 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 PPP1R2P1Q96PQ5 205 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 IL12RB2Q99665 862 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 S1PR5Q9H228 398 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 TTYH1Q9H313 450 aaPredicted RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 TRPV4Q9HBA0 871 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 HAUS2Q9NVX0 235 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 SEPT10Q9P0V9 454 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 KLHL8Q9P2G9 620 aaPredicted RBP5.61□□□□□ -1.51
LINC00254-202ENST00000633813 IGSF9Q9P2J2 1179 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 FAM153AQ9UHL3 310 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 HPCAL4Q9UM19 191 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 PHTF1Q9UMS5 762 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 MYO16Q9Y6X6 1858 aa5.61□□□□□ -1.51
LINC00254-202ENST00000633813 GBF1Q92538 1859 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 A0A0D9SEW6 157 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 ERI2A8K979 691 aaKnown RBP5.6□□□□□ -1.51
LINC00254-202ENST00000633813 J3KR12 359 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 MAP2K7O14733 419 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 EIF3HO15372 352 aaKnown RBP eCLIP5.6□□□□□ -1.51
LINC00254-202ENST00000633813 KDELR3O43731 214 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 CACNG3O60359 315 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 PRAMEF11O60813 436 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 LUC7L3O95232 432 aaKnown RBP5.6□□□□□ -1.51
LINC00254-202ENST00000633813 PENKP01210 267 aaPredicted RBP5.6□□□□□ -1.51
LINC00254-202ENST00000633813 APRTP07741 180 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 RHOCP08134 193 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 PRR35P0CG20 571 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 MLNP12872 115 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 EGR1P18146 543 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 TPSB2P20231 275 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 KELP23276 732 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 MST1P26927 711 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 HOXD9P28356 352 aaPredicted RBP5.6□□□□□ -1.51
LINC00254-202ENST00000633813 MPGP29372 298 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 MTHFRP42898 656 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 TNNT3P45378 269 aaPredicted RBP5.6□□□□□ -1.51
LINC00254-202ENST00000633813 SGSHP51688 502 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 PLK1P53350 603 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 ZBTB17Q13105 803 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 CDH18Q13634 790 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 PRPSAP1Q14558 356 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 CASP8Q14790 479 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 MFSD13AQ14CX5 517 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 ACOX1Q15067 660 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 TPSAB1Q15661 275 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 FSCBQ5H9T9 825 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 CEP78Q5JTW2 689 aa5.6□□□□□ -1.51
LINC00254-202ENST00000633813 FAM78AQ5JUQ0 283 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms