RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 SLC22A18Q96BI1 424 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 TBL1YQ9BQ87 522 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 FERMT1Q9BQL6 677 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 LUC7LQ9NQ29 371 aaKnown RBP19.26■□□□□ 0.67
TARDBP-228ENST00000629725 INTS7Q9NVH2 962 aaKnown RBP19.26■□□□□ 0.67
TARDBP-228ENST00000629725 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.26■□□□□ 0.67
TARDBP-228ENST00000629725 SH3BGRL2Q9UJC5 107 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 PRSS21Q9Y6M0 314 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 MAU2Q9Y6X3 613 aa19.26■□□□□ 0.67
TARDBP-228ENST00000629725 MTORP42345 2549 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 CPAMD8Q8IZJ3 1885 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 SLC5A10A0PJK1 596 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 BHMG1C9JSJ3 638 aaPredicted RBP19.25■□□□□ 0.67
TARDBP-228ENST00000629725 ZRANB2O95218 330 aaKnown RBP eCLIP19.25■□□□□ 0.675e-13■□□□□ 10.2
TARDBP-228ENST00000629725 PKLRP30613 574 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 CACNG1Q06432 222 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 ANKRD20A2Q5SQ80 823 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 ANKRD20A1Q5TYW2 823 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 ANKRD20A3Q5VUR7 823 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 XKRXQ6PP77 449 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 CCDC50Q8IVM0 306 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 LINC01555Q8NAE3 123 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 BRIX1Q8TDN6 353 aaKnown RBP19.25■□□□□ 0.67
TARDBP-228ENST00000629725 C8orf44Q96CB5 159 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 SELENOSQ9BQE4 189 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.25■□□□□ 0.67
TARDBP-228ENST00000629725 ARNT2Q9HBZ2 717 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 NLE1Q9NVX2 485 aaPredicted RBP19.25■□□□□ 0.67
TARDBP-228ENST00000629725 SEC14L3Q9UDX4 400 aa19.25■□□□□ 0.67
TARDBP-228ENST00000629725 FEZ2Q9UHY8 353 aaPredicted RBP19.25■□□□□ 0.67
TARDBP-228ENST00000629725 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.25■□□□□ 0.671e-6■□□□□ 9.2
TARDBP-228ENST00000629725 NSG1A0A0A6YYJ2 146 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 APOC4-APOC2K7ER74 178 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 RASAL1O95294 804 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 CRYABP02511 175 aaKnown RBP19.24■□□□□ 0.67
TARDBP-228ENST00000629725 APOC2P02655 101 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 PRR35P0CG20 571 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 FDXRP22570 491 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 SOX11P35716 441 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 OCA2Q04671 838 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 RBPJQ06330 500 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 ATG9BQ674R7 924 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 LUZP1Q86V48 1076 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 RCOR2Q8IZ40 523 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 ZNF295-AS1Q8N0V1 137 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 DTWD1Q8N5C7 304 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 STT3BQ8TCJ2 826 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 PSMF1Q92530 271 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 MIEF2Q96C03 454 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 ZNF304Q9HCX3 659 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 ENAMQ9NRM1 1142 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 SPTLC3Q9NUV7 552 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 ABI3Q9P2A4 366 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 ZNF282Q9UDV7 671 aaPredicted RBP19.24■□□□□ 0.67
TARDBP-228ENST00000629725 C3orf18Q9UK00 162 aa19.24■□□□□ 0.67
TARDBP-228ENST00000629725 MRPS2Q9Y399 296 aaKnown RBP19.24■□□□□ 0.67
TARDBP-228ENST00000629725 FITM1A5D6W6 292 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 UQCRHP07919 91 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 ZGLP1P0C6A0 271 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 CD9P21926 228 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 MST1P26927 711 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 SSTR2P30874 369 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 SPARCL1Q14515 664 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 SF1Q15637 639 aaKnown RBP19.23■□□□□ 0.67
TARDBP-228ENST00000629725 KRTAP21-3Q3LHN1 58 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 CAVIN1Q6NZI2 390 aaKnown RBP19.23■□□□□ 0.67
TARDBP-228ENST00000629725 FIGLAQ6QHK4 219 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 NDUFAF7Q7L592 441 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 PRSS58Q8IYP2 241 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 KATNAL2Q8IYT4 538 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 C2orf73Q8N5S3 287 aaPredicted RBP19.23■□□□□ 0.67
TARDBP-228ENST00000629725 SIRT6Q8N6T7 355 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 OR8K1Q8NGG5 319 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 DNAJB8Q8NHS0 232 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 LRRC45Q96CN5 670 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 CDKN2AIPNLQ96HQ2 116 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 ZNF285Q96NJ3 590 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 PPP1R2P1Q96PQ5 205 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 HEMGNQ9BXL5 484 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 ALG6Q9Y672 507 aa19.23■□□□□ 0.67
TARDBP-228ENST00000629725 NCOA6Q14686 2063 aaPredicted RBP19.23■□□□□ 0.67
TARDBP-228ENST00000629725 S1PR4O95977 384 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 F10P00742 488 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 OR56A5P0C7T3 313 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 CASP6P55212 293 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 SRSF11Q05519 484 aaKnown RBP19.22■□□□□ 0.67
TARDBP-228ENST00000629725 ITIH4Q14624 930 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 TESK1Q15569 626 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 DNAJC21Q5F1R6 531 aaKnown RBP19.22■□□□□ 0.67
TARDBP-228ENST00000629725 PACS1Q6VY07 963 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 BBS12Q6ZW61 710 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 TAX1BP1Q86VP1 789 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 LMNTD1Q8N9Z9 388 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 DNAJC7Q99615 494 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 MENTQ9BUN1 341 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 ZNHIT6Q9NWK9 470 aaKnown RBP19.22■□□□□ 0.67
TARDBP-228ENST00000629725 IFNKQ9P0W0 207 aa19.22■□□□□ 0.67
TARDBP-228ENST00000629725 CACNA1CQ13936 2221 aa19.21■□□□□ 0.67
TARDBP-228ENST00000629725 HYKKA2RU49 373 aa19.21■□□□□ 0.67
TARDBP-228ENST00000629725 KCNN4O15554 427 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms