RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 RHBDD1Q8TEB9 315 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 LPGAT1Q92604 370 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 COQ10AQ96MF6 247 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 NSMCE3Q96MG7 304 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 SEMA4BQ9NPR2 832 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 PRPF19Q9UMS4 504 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 HEBP2Q9Y5Z4 205 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 TMEM233B4DJY2 109 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 BDKRB1P46663 353 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 CDC16Q13042 620 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 TECRLQ5HYJ1 363 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 HENMT1Q5T8I9 393 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 TMEM198Q66K66 360 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 TRIM69Q86WT6 500 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 TMEM105Q8N8V8 129 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 MFSD2AQ8NA29 543 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 OR4E2Q8NGC2 313 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 JPH3Q8WXH2 748 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 PDXPQ96GD0 296 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 SLC25A23Q9BV35 468 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 MUC6Q6W4X9 2439 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 PIM1P11309 404 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 PIK3R1P27986 724 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 DNAJB13P59910 316 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 DMWDQ09019 674 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 DUOXA1Q1HG43 343 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 GALNT7Q86SF2 657 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 PYDC1Q8WXC3 89 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 FUBP1Q96AE4 644 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 PPWD1Q96BP3 646 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 CATSPER2Q96P56 530 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 SMOC1Q9H4F8 434 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 PRDM8Q9NQV8 689 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 PLAGL1Q9UM63 463 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 C2orf16Q68DN1 1984 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 CER1O95813 267 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 MLYCDO95822 493 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 SNX32Q86XE0 403 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 ANKRD49Q8WVL7 239 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 LGR4Q9BXB1 951 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 IRF2BPLQ9H1B7 796 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 RMI1Q9H9A7 625 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 NDOR1Q9UHB4 597 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 KCNE2Q9Y6J6 123 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 PRSS21Q9Y6M0 314 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 OR52A4PA6NMU1 304 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 CASQ2O14958 399 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 CNR2P34972 360 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 KCNC1P48547 511 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 TAS2R38P59533 333 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 DCDC1P59894 354 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 PHEXP78562 749 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 SQLEQ14534 574 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 CYP2A13Q16696 494 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 CHSY3Q70JA7 882 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 TECPR1Q7Z6L1 1165 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 SLC9B2Q86UD5 537 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 CEP76Q8TAP6 659 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 OR1E3Q8WZA6 343 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 GBP5Q96PP8 586 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 MID1IP1Q9NPA3 183 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 SLC6A14Q9UN76 642 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 DHRS7Q9Y394 339 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 CAPNS1P04632 268 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 NDUFS1P28331 727 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 CDH13P55290 713 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 SEMA3AQ14563 771 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 AGKQ53H12 422 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 ADAMTSL4Q6UY14 1074 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 CADM4Q8NFZ8 388 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 NCSTNQ92542 709 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 CLDN23Q96B33 292 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 PYCR2Q96C36 320 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 ELOVL6Q9H5J4 265 aa12.12□□□□□ -0.47
SYNGAP1-207ENST00000628646 CDC7O00311 574 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 C8GP07360 202 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 EPB42P16452 691 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 HSPA7P48741 367 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 HK3P52790 923 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 KCNK10P57789 538 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 ACVR1Q04771 509 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 FLOT2Q14254 428 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 ZNF423Q2M1K9 1284 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 PIGGQ5H8A4 983 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 CAPN13Q6MZZ7 669 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 PDSS2Q86YH6 399 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 FAM9CQ8IZT9 166 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 OXR1Q8N573 874 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 DDHD1Q8NEL9 900 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 ZDHHC1Q8WTX9 485 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 ECSITQ9BQ95 431 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 XKR8Q9H6D3 395 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 ZBTB26Q9HCK0 441 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 UBXN8O00124 270 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 SDHDO14521 159 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 NUAK1O60285 661 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 CDKN2DP55273 166 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 PRMT9Q6P2P2 845 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 MACC1Q6ZN28 852 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 ICA1LQ8NDH6 482 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms