RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 GEMIN8Q9NWZ8 242 aaKnown RBP21.53■■□□□ 1.04
SF1-220ENST00000626028 CORO1CQ9ULV4 474 aaPredicted RBP21.53■■□□□ 1.04
SF1-220ENST00000626028 SRPK3Q9UPE1 567 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 TEX264Q9Y6I9 313 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 FAM187AA6NFU0 413 aa21.52■■□□□ 1.04
SF1-220ENST00000626028 EFCAB8A8MWE9 144 aa21.52■■□□□ 1.04
SF1-220ENST00000626028 MYO1CO00159 1063 aa21.52■■□□□ 1.04
SF1-220ENST00000626028 HAUS5O94927 633 aa21.52■■□□□ 1.04
SF1-220ENST00000626028 CD63P08962 238 aa21.52■■□□□ 1.04
SF1-220ENST00000626028 ITGA8P53708 1063 aa21.52■■□□□ 1.04
SF1-220ENST00000626028 SF1Q15637 639 aaKnown RBP21.52■■□□□ 1.04
SF1-220ENST00000626028 ZC3H12BQ5HYM0 836 aaKnown RBP21.52■■□□□ 1.04
SF1-220ENST00000626028 EXD3Q8N9H8 876 aa21.52■■□□□ 1.04
SF1-220ENST00000626028 MR1Q95460 341 aa21.52■■□□□ 1.04
SF1-220ENST00000626028 AARSD1Q9BTE6 412 aaKnown RBP21.52■■□□□ 1.04
SF1-220ENST00000626028 SLC7A5P2Q9GIP4 190 aa21.52■■□□□ 1.04
SF1-220ENST00000626028 KLHL25Q9H0H3 589 aa21.52■■□□□ 1.04
SF1-220ENST00000626028 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.52■■□□□ 1.04
SF1-220ENST00000626028 GALPQ9UBC7 116 aa21.52■■□□□ 1.04
SF1-220ENST00000626028 ZC3H7BQ9UGR2 993 aaKnown RBP21.52■■□□□ 1.04
SF1-220ENST00000626028 ZNF749O43361 778 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 KATNA1O75449 491 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 ERVK-10P10266 1014 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 MAGP20916 626 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 AGXTP21549 392 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 BDKRB1P46663 353 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 ILF2Q12905 390 aaKnown RBP21.51■■□□□ 1.03
SF1-220ENST00000626028 STEAP4Q687X5 459 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 RHBDD2Q6NTF9 364 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 SPATA4Q8NEY3 305 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 PROKR1Q8TCW9 393 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 ASB11Q8WXH4 323 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 FAM136AQ96C01 138 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 KRT12Q99456 494 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 TRIM51Q9BSJ1 452 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 NLNQ9BYT8 704 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 ACTL8Q9H568 366 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 PCMTD2Q9NV79 361 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 TAS2R13Q9NYV9 303 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 POLHQ9Y253 713 aa21.51■■□□□ 1.03
SF1-220ENST00000626028 FARSAQ9Y285 508 aaKnown RBP21.51■■□□□ 1.03
SF1-220ENST00000626028 ARHGEF33A8MVX0 844 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 E7ESA3 106 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 GFYI3L273 518 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 TP73O15350 636 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 ZSCAN9O15535 394 aaPredicted RBP21.5■■□□□ 1.03
SF1-220ENST00000626028 PRB1P04280 392 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 PRKAR1AP10644 381 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 ELK3P41970 407 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 MPP1Q00013 466 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 YOD1Q5VVQ6 348 aaPredicted RBP21.5■■□□□ 1.03
SF1-220ENST00000626028 IGDCC3Q8IVU1 814 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 SYTL1Q8IYJ3 562 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 GIMAP7Q8NHV1 300 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 CD200R1Q8TD46 325 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 THAP4Q8WY91 577 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 IL17FQ96PD4 163 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 GPR21Q99679 349 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 DHRS4Q9BTZ2 278 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 WHRNQ9P202 907 aa21.5■■□□□ 1.03
SF1-220ENST00000626028 RUVBL2Q9Y230 463 aaKnown RBP21.5■■□□□ 1.03
SF1-220ENST00000626028 MRPS18BQ9Y676 258 aaKnown RBP21.5■■□□□ 1.03
SF1-220ENST00000626028 ZBTB14O43829 449 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 FAM87AP0C7U9 286 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 RGS4P49798 205 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 POLE2P56282 527 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 CALCOCO2Q13137 446 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 UGT8Q16880 541 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 CCSMST1Q4G0I0 132 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 TCTE1Q5JU00 501 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 C16orf46Q6P387 395 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 FIGLAQ6QHK4 219 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 OR2L3Q8NG85 312 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 OR2A1Q8NGT9 310 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 SMPDL3AQ92484 453 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 DLG3Q92796 817 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 SLC30A3Q99726 388 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 SEMA4CQ9C0C4 833 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 CHST8Q9H2A9 424 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 AKIRIN1Q9H9L7 192 aaPredicted RBP21.49■■□□□ 1.03
SF1-220ENST00000626028 STARD5Q9NSY2 213 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 EURLQ9NYK6 297 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 ANKMY1Q9P2S6 941 aa21.49■■□□□ 1.03
SF1-220ENST00000626028 TRMT6Q9UJA5 497 aaKnown RBP21.49■■□□□ 1.03
SF1-220ENST00000626028 SRPX2O60687 465 aaPredicted RBP21.48■■□□□ 1.03
SF1-220ENST00000626028 BANF1O75531 89 aa21.48■■□□□ 1.03
SF1-220ENST00000626028 AHSGP02765 367 aa21.48■■□□□ 1.03
SF1-220ENST00000626028 ARSFP54793 590 aa21.48■■□□□ 1.03
SF1-220ENST00000626028 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.48■■□□□ 1.03
SF1-220ENST00000626028 TEDDM1Q5T9Z0 273 aa21.48■■□□□ 1.03
SF1-220ENST00000626028 PRAMEF17Q5VTA0 474 aa21.48■■□□□ 1.03
SF1-220ENST00000626028 ZNF385CQ66K41 422 aaPredicted RBP21.48■■□□□ 1.03
SF1-220ENST00000626028 FAM199XQ6PEV8 388 aaPredicted RBP21.48■■□□□ 1.03
SF1-220ENST00000626028 ZNF572Q7Z3I7 529 aaPredicted RBP21.48■■□□□ 1.03
SF1-220ENST00000626028 MCATQ8IVS2 390 aaKnown RBP21.48■■□□□ 1.03
SF1-220ENST00000626028 ZNF285Q96NJ3 590 aa21.48■■□□□ 1.03
SF1-220ENST00000626028 ERP44Q9BS26 406 aa21.48■■□□□ 1.03
SF1-220ENST00000626028 NDC1Q9BTX1 674 aa21.48■■□□□ 1.03
SF1-220ENST00000626028 PPANQ9NQ55 473 aaKnown RBP21.48■■□□□ 1.03
SF1-220ENST00000626028 CIDEBQ9UHD4 219 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms