RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.97□□□□□ -0.65
VARS2-213ENST00000625423 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.97□□□□□ -0.65
VARS2-213ENST00000625423 KRT87PA6NCN2 255 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 NPIPB15A6NHN6 443 aaPredicted RBP10.97□□□□□ -0.65
VARS2-213ENST00000625423 FSHRP23945 695 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 PTPN6P29350 595 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 CCR7P32248 378 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 RAD23AP54725 363 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 GP2P55259 537 aaKnown RBP10.97□□□□□ -0.65
VARS2-213ENST00000625423 CDK5R2Q13319 367 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 GPR33Q49SQ1 333 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 CARD16Q5EG05 197 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 RETSATQ6NUM9 610 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 METTL2BQ6P1Q9 378 aaKnown RBP10.97□□□□□ -0.65
VARS2-213ENST00000625423 DOK6Q6PKX4 331 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 TPGS1Q6ZTW0 290 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 TMEM150AQ86TG1 271 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 ZDHHC21Q8IVQ6 265 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 SKA2Q8WVK7 121 aaPredicted RBP10.97□□□□□ -0.65
VARS2-213ENST00000625423 TRUB1Q8WWH5 349 aaKnown RBP10.97□□□□□ -0.65
VARS2-213ENST00000625423 KCTD5Q9NXV2 234 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 CLEC4EQ9ULY5 219 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 BACE2Q9Y5Z0 518 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 CFAP99D6REC4 459 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 SLC16A6O15403 523 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 BNIP3LO60238 219 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 GREM1O60565 184 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 CYP4B1P13584 511 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 SDC1P18827 310 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 HOXD10P28358 340 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 NSG1P42857 185 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 ITGADQ13349 1161 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 GTF2H3Q13889 308 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 SIM2Q14190 667 aaPredicted RBP10.97□□□□□ -0.65
VARS2-213ENST00000625423 TXNDC8Q6A555 127 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 GRAMD4Q6IC98 578 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 UBE2R2Q712K3 238 aaPredicted RBP10.97□□□□□ -0.65
VARS2-213ENST00000625423 PIWIL3Q7Z3Z3 882 aaKnown RBP10.97□□□□□ -0.65
VARS2-213ENST00000625423 CYP4Z1Q86W10 505 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 CRIPAKQ8N1N5 446 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 BEND7Q8N7W2 519 aaPredicted RBP10.97□□□□□ -0.65
VARS2-213ENST00000625423 ABHD11Q8NFV4 315 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 DNAJB8Q8NHS0 232 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 APIPQ96GX9 242 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 REXO5Q96IC2 774 aaKnown RBP10.97□□□□□ -0.65
VARS2-213ENST00000625423 DOLKQ9UPQ8 538 aa10.97□□□□□ -0.65
VARS2-213ENST00000625423 RFXANKO14593 260 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 HOXB9P17482 250 aaPredicted RBP10.96□□□□□ -0.65
VARS2-213ENST00000625423 IGFBP5P24593 272 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 RYKP34925 604 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 PHEXP78562 749 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 B4GALNT1Q00973 533 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 HSPA14Q0VDF9 509 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 CPZQ66K79 652 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 OR4F3Q6IEY1 312 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 CRTC1Q6UUV9 634 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 RFLNAQ6ZTI6 216 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 CEP68Q76N32 757 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 DNAJB7Q7Z6W7 309 aaPredicted RBP10.96□□□□□ -0.65
VARS2-213ENST00000625423 RNF175Q8N4F7 328 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 APOLD1Q96LR9 279 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 RIBC2Q9H4K1 309 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 ATP13A3Q9H7F0 1226 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 MBD1Q9UIS9 605 aaPredicted RBP10.96□□□□□ -0.65
VARS2-213ENST00000625423 ENPP5Q9UJA9 477 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 ABCG2Q9UNQ0 655 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 COQ6Q9Y2Z9 468 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 CPQQ9Y646 472 aa10.96□□□□□ -0.65
VARS2-213ENST00000625423 WNT9AO14904 365 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 HOXA2O43364 376 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 NDUFS2O75306 463 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 ABLIM3O94929 683 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 DIRAS1O95057 198 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 ANGPTL1O95841 491 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 FUCA1P04066 466 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 PRPS2P11908 318 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 ITIH1P19827 911 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 FMO3P31513 532 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 CCR3P51677 355 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 ATN1P54259 1190 aaPredicted RBP10.96□□□□□ -0.66
VARS2-213ENST00000625423 EMX1Q04741 257 aaPredicted RBP10.96□□□□□ -0.66
VARS2-213ENST00000625423 ABHD18Q0P651 414 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 ATP13A5Q4VNC0 1218 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 DGKKQ5KSL6 1271 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 GALNT10Q86SR1 603 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 SNX6Q9UNH7 406 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 NAALAD2Q9Y3Q0 740 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 TET1Q8NFU7 2136 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 ZNF99A8MXY4 864 aaPredicted RBP10.96□□□□□ -0.66
VARS2-213ENST00000625423 UPK3BL1B0FP48 263 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 MYO1GB0I1T2 1018 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 UPK3BL2E5RIL1 263 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 ZNF821O75541 412 aaPredicted RBP10.96□□□□□ -0.66
VARS2-213ENST00000625423 CCDC159P0C7I6 412 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 OPRL1P41146 370 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 VEPH1Q14D04 833 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 CTF1Q16619 201 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 RFX4Q33E94 735 aa10.96□□□□□ -0.66
VARS2-213ENST00000625423 SHQ1Q6PI26 577 aaKnown RBP10.96□□□□□ -0.66
VARS2-213ENST00000625423 IGFN1Q86VF2 1251 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms