RNA–Protein interactions for RNA: ENST00000622963.3

SNHG5-213, Transcript of small nucleolar RNA host gene 5, human

TSL 5 BASIC

Gene SNHG5, Length 753 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-213	ENST00000622963	MVB12B	Q9H7P6	319 aa		11.16	□□□□□ -0.62
SNHG5-213	ENST00000622963	CUTC	Q9NTM9	273 aa		11.16	□□□□□ -0.62
SNHG5-213	ENST00000622963	FAM153A	Q9UHL3	310 aa		11.16	□□□□□ -0.62
SNHG5-213	ENST00000622963	MEMO1	Q9Y316	297 aa		11.16	□□□□□ -0.62
SNHG5-213	ENST00000622963	MRPS2	Q9Y399	296 aa	Known RBP	11.16	□□□□□ -0.62
SNHG5-213	ENST00000622963	AKAP6	Q13023	2319 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	MAP1A	P78559	2803 aa	Predicted RBP	11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	DYTN	A2CJ06	578 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	KLHL33	A6NCF5	533 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	AGAP14	A8MT82	685 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	MYO1F	O00160	1098 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	ADAM10	O14672	748 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	DSCR3	O14972	297 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	STX7	O15400	261 aa	Known RBP	11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	PROSC	O94903	275 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	ACPP	P15309	386 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	ST13	P50502	369 aa	Known RBP	11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	SMS	P52788	366 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	EFNA3	P52797	238 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	ATG9B	Q674R7	924 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	C3P1	Q6ZMU1	363 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963		Q6ZPB1	254 aa	Predicted RBP	11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	HOOK3	Q86VS8	718 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	MCAT	Q8IVS2	390 aa	Known RBP	11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	KBTBD2	Q8IY47	623 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	IPMK	Q8NFU5	416 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	OR4K2	Q8NGD2	314 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	OR13C4	Q8NGS5	318 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	CPLX3	Q8WVH0	158 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.15	□□□□□ -0.62	4e-8	■□□□□ 10.5
SNHG5-213	ENST00000622963	STOX2	Q9P2F5	926 aa	Predicted RBP	11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	SAE1	Q9UBE0	346 aa	Predicted RBP	11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	TNFRSF10D	Q9UBN6	386 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	PKP3	Q9Y446	797 aa		11.15	□□□□□ -0.62
SNHG5-213	ENST00000622963	VPS13C	Q709C8	3753 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	IFRD1	O00458	451 aa	Predicted RBP	11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	MAP2K7	O14733	419 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	FFAR3	O14843	346 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	GPR42	O15529	346 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	NRP2	O60462	931 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	USP1	O94782	785 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	CRYAB	P02511	175 aa	Known RBP	11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	ITGAM	P11215	1152 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	PYGM	P11217	842 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	ESRRA	P11474	423 aa	Predicted RBP	11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	IGFBP2	P18065	325 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	ACADL	P28330	430 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	DNAJA1	P31689	397 aa	Known RBP	11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	GRIA3	P42263	894 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	CD151	P48509	253 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	IST1	P53990	364 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	EEF1A2	Q05639	463 aa	Known RBP	11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	PDK1	Q15118	436 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	SASS6	Q6UVJ0	657 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	NAPRT	Q6XQN6	538 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	TGIF2LY	Q8IUE0	185 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	LINC01555	Q8NAE3	123 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	DNAJB8	Q8NHS0	232 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	STT3B	Q8TCJ2	826 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	DLG3	Q92796	817 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	ZNF285	Q96NJ3	590 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	HES7	Q9BYE0	225 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	DLL4	Q9NR61	685 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	HACD3	Q9P035	362 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	CIDEB	Q9UHD4	219 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	CPAMD8	Q8IZJ3	1885 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	ABCA4	P78363	2273 aa		11.14	□□□□□ -0.63
SNHG5-213	ENST00000622963	FLNA	P21333	2647 aa	Known RBP	11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	IGLV3-16	A0A075B6K0	115 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963		A0A087X0T9	212 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	LRRD1	A4D1F6	860 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	ISM1	B1AKI9	464 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	APOL1	O14791	398 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	PRAMEF2	O60811	474 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	AGT	P01019	485 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	EPO	P01588	193 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	SERPINA7	P05543	415 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	FAM228B	P0C875	321 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	ATP1B2	P14415	290 aa	Predicted RBP	11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	DRD2	P14416	443 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	PECAM1	P16284	738 aa	Predicted RBP	11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	SHMT2	P34897	504 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	DYNLT1	P63172	113 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	FANCC	Q00597	558 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	HSF1	Q00613	529 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	RBPJ	Q06330	500 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	MSLN	Q13421	630 aa	Predicted RBP	11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	FGD2	Q7Z6J4	655 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	SPPL2C	Q8IUH8	684 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	MAP7D3	Q8IWC1	876 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	CLDN19	Q8N6F1	224 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	CCDC110	Q8TBZ0	833 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	DCUN1D1	Q96GG9	259 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	DMRTA2	Q96SC8	542 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	CXXC4	Q9H2H0	198 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	CRLS1	Q9UJA2	301 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	C3orf18	Q9UK00	162 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms