RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 MRPL14Q6P1L8 145 aaKnown RBP23.05■■□□□ 1.28
ATXN3-253ENST00000621269 CASC4Q6P4E1 433 aa23.05■■□□□ 1.28
ATXN3-253ENST00000621269 CNSTQ6PJW8 725 aa23.05■■□□□ 1.28
ATXN3-253ENST00000621269 FAM26EQ8N5C1 309 aa23.05■■□□□ 1.28
ATXN3-253ENST00000621269 ZUFSPQ96AP4 578 aa23.05■■□□□ 1.28
ATXN3-253ENST00000621269 BIRC8Q96P09 236 aa23.05■■□□□ 1.28
ATXN3-253ENST00000621269 PPP2R2CQ9Y2T4 447 aa23.05■■□□□ 1.28
ATXN3-253ENST00000621269 TNRC6AQ8NDV7 1962 aaKnown RBP23.04■■□□□ 1.28
ATXN3-253ENST00000621269 A0A1B0GX78 115 aa23.04■■□□□ 1.28
ATXN3-253ENST00000621269 TARM1B6A8C7 271 aa23.04■■□□□ 1.28
ATXN3-253ENST00000621269 ESR1P03372 595 aa23.04■■□□□ 1.28
ATXN3-253ENST00000621269 CHRM3P20309 590 aa23.04■■□□□ 1.28
ATXN3-253ENST00000621269 GRM7Q14831 915 aa23.04■■□□□ 1.28
ATXN3-253ENST00000621269 KCTD19Q17RG1 926 aaPredicted RBP23.04■■□□□ 1.28
ATXN3-253ENST00000621269 TYSND1Q2T9J0 566 aa23.04■■□□□ 1.28
ATXN3-253ENST00000621269 JMJD6Q6NYC1 403 aaPredicted RBP23.04■■□□□ 1.28
ATXN3-253ENST00000621269 TTC29Q8NA56 475 aaPredicted RBP23.04■■□□□ 1.28
ATXN3-253ENST00000621269 LPGAT1Q92604 370 aa23.04■■□□□ 1.28
ATXN3-253ENST00000621269 SMAD5Q99717 465 aaKnown RBP23.04■■□□□ 1.28
ATXN3-253ENST00000621269 SELENOSQ9BQE4 189 aa23.04■■□□□ 1.28
ATXN3-253ENST00000621269 MFRPQ9BY79 579 aa23.04■■□□□ 1.28
ATXN3-253ENST00000621269 SLAMF7Q9NQ25 335 aa23.04■■□□□ 1.28
ATXN3-253ENST00000621269 SAMD15Q9P1V8 674 aa23.04■■□□□ 1.28
ATXN3-253ENST00000621269 TSR3Q9UJK0 312 aaKnown RBP23.04■■□□□ 1.28
ATXN3-253ENST00000621269 RUVBL2Q9Y230 463 aaKnown RBP23.04■■□□□ 1.28
ATXN3-253ENST00000621269 CRYL1Q9Y2S2 319 aa23.04■■□□□ 1.28
ATXN3-253ENST00000621269 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.03■■□□□ 1.28
ATXN3-253ENST00000621269 PRICKLE3O43900 615 aaPredicted RBP23.03■■□□□ 1.28
ATXN3-253ENST00000621269 KLHL41O60662 606 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 CNOT3O75175 753 aaKnown RBP23.03■■□□□ 1.28
ATXN3-253ENST00000621269 NIPSNAP2O75323 286 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 AVILO75366 819 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 SORBS2O94875 1100 aaKnown RBP23.03■■□□□ 1.28
ATXN3-253ENST00000621269 KRT14P02533 472 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 KCNJ11Q14654 390 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 CYP2A13Q16696 494 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 CCSMST1Q4G0I0 132 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 DCAF10Q5QP82 559 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 YOD1Q5VVQ6 348 aaPredicted RBP23.03■■□□□ 1.28
ATXN3-253ENST00000621269 ARMC3Q5W041 872 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 KIAA0930Q6ICG6 404 aaPredicted RBP23.03■■□□□ 1.28
ATXN3-253ENST00000621269 GALNT11Q8NCW6 608 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 HMGCLL1Q8TB92 370 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 FAM136AQ96C01 138 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 CUTCQ9NTM9 273 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 P4HTMQ9NXG6 502 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 C5AR2Q9P296 337 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 VPS9D1Q9Y2B5 631 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 MAP4K5Q9Y4K4 846 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 SPTBP11277 2137 aa23.03■■□□□ 1.28
ATXN3-253ENST00000621269 CLEC18AA5D8T8 446 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 DSCR3O14972 297 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 OGNP20774 298 aaKnown RBP23.02■■□□□ 1.28
ATXN3-253ENST00000621269 ATP5DP30049 168 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 GCGRP47871 477 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 ADARP55265 1226 aaKnown RBP23.02■■□□□ 1.28
ATXN3-253ENST00000621269 CCZ1BP86790 482 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 CCZ1P86791 482 aaPredicted RBP23.02■■□□□ 1.28
ATXN3-253ENST00000621269 VWA5B1Q5TIE3 1220 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 CLEC18BQ6UXF7 455 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 GALNT16Q8N428 558 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 CLEC18CQ8NCF0 446 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 FKBP10Q96AY3 582 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 MIPEPQ99797 713 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 SLC22A11Q9NSA0 550 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 SPATA7Q9P0W8 599 aa23.02■■□□□ 1.28
ATXN3-253ENST00000621269 MAGEB16A2A368 324 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 E5RI56 91 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 SRPX2O60687 465 aaPredicted RBP23.01■■□□□ 1.27
ATXN3-253ENST00000621269 MATN4O95460 622 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 ALPPP05187 535 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 UMODP07911 640 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 MCM3P25205 808 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 PSMB5P28074 263 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 MAGEA6P43360 314 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 FOXL2P58012 376 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 FAM214AQ32MH5 1076 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 NEPROQ6NW34 567 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 OVCH1Q7RTY7 1134 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 PPP1R32Q7Z5V6 425 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 RBMXL3Q8N7X1 1067 aaKnown RBP23.01■■□□□ 1.27
ATXN3-253ENST00000621269 OR2L3Q8NG85 312 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 MAGOHBQ96A72 148 aaKnown RBP23.01■■□□□ 1.27
ATXN3-253ENST00000621269 PNPLA2Q96AD5 504 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 WDR54Q9H977 334 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 LUZP4Q9P127 313 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 MAP10Q9P2G4 905 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 FAM169AQ9Y6X4 670 aa23.01■■□□□ 1.27
ATXN3-253ENST00000621269 KRT87PA6NCN2 255 aa23■■□□□ 1.27
ATXN3-253ENST00000621269 ALBP02768 609 aa23■■□□□ 1.27
ATXN3-253ENST00000621269 PKMP14618 531 aaKnown RBP23■■□□□ 1.27
ATXN3-253ENST00000621269 VARSP26640 1264 aaKnown RBP23■■□□□ 1.27
ATXN3-253ENST00000621269 VSX2P58304 361 aaPredicted RBP23■■□□□ 1.27
ATXN3-253ENST00000621269 SRSF1Q07955 248 aaKnown RBP eCLIP23■■□□□ 1.27
ATXN3-253ENST00000621269 MYBPC3Q14896 1274 aa23■■□□□ 1.27
ATXN3-253ENST00000621269 NAA25Q14CX7 972 aa23■■□□□ 1.27
ATXN3-253ENST00000621269 INPP5JQ15735 1006 aaPredicted RBP23■■□□□ 1.27
ATXN3-253ENST00000621269 ANKRD20A4Q4UJ75 823 aa23■■□□□ 1.27
ATXN3-253ENST00000621269 SLC6A19Q695T7 634 aa23■■□□□ 1.27
ATXN3-253ENST00000621269 CAND1Q86VP6 1230 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms